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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1pota_

Fold library idFoldSuperfamilyFamily
d1pota_Periplasmic binding protein-like IIPeriplasmic binding protein-like IIPhosphate binding protein-like


Added to library: Tue Mar 16 14:19:31 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NNTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGM
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Known secondary structure (DSSP)
SSSS
TT
S
TT
SSS
SSBB

BGGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYKGSLLL
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Known secondary structure (DSSP) B



TTS
TTGGGB
GGGS

TTSTT
SS
TTTS
TTT

SSGGGGSGGGTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TDDAREVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGSAFV
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Known secondary structure (DSSP)
S
TT

TT


TGGG
SS
TTTS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence ARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIGYPTPNLAARKLLS
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Known secondary structure (DSSP) TTS



TT

B
BTT
TTS



SBSTTTTTS
 .........290.........300.........310.........320..
Sequence PEVANDKTLYPDAETIKNGEWQNDVGAASSIYEEYYQKLKAG
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Known secondary structure (DSSP) T
TTTS

S



GGGTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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