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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1pgl11

Fold library idFoldSuperfamilyFamily
d1pgl11Nucleoplasmin-like/VP (viral coat and capsid proteins)Positive stranded ssRNA virusesComoviridae-like VP


Added to library: Tue Mar 16 12:10:43 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence SISQQTVWNQMATVRTPLNFDSSKQSFCQFSVDLLGGGISVDKTGDWITLVQNSPISNLLRVAAWKKGCL
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Known secondary structure (DSSP)



TT



TT

TTT
STTTT
SSS




 .........80.........90.........100.........110.........120.........130.........140
Sequence MVKVVMSGNAAVKRSDWASLVQVFLTNSNSTEHFDACRWTKSEPHSWELIFPIEVCGPNNGFEMWSSEWA
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Known secondary structure (DSSP)

TTS
GGG


S
SSTTS

S

SS
BTTTB
B
TT
TTT
 .........150.........160.........170.........180.....
Sequence NQTSWHLSFLVDNPKQSTTFDVLLGISQNFEIAGNTLMPAFSVPQ
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Known secondary structure (DSSP) T



STTTS

TT











Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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