Fold library entry viewer: d1pama4

Added to library: Tue Mar 16 14:20:17 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	P	D	T	S	V	S	N	K	Q	N	F	S	T	D	V	I	Y	Q	I	F	T	D	R	F	S	D	G	N	P	A	N	N	P	T	G	A	A	F	D	G	S	C	T	N	L	R	L	Y	C	G	G	D	W	Q	G	I	I	N	K	I	N	D	G	Y	L	T	G	M	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	T	T			S			T	T								G	G	G	T			S		G	G	G				G	G	G	B		T	T			S	T	T	S	B														T	T	T	T	G	G	G	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	T	A	I	W	I	S	Q	P	V	E	N	I	Y	S	V	I	N	Y	S	G	V	N	N	T	A	Y	H	G	Y	W	A	R	D	F	K	K	T	N	P	A	Y	G	T	M	Q	D	F	K	N	L	I	D	T	A	H	A	H	N	I	K	V	I	I	D	F	A	P	N	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T						T	T	S		S									T	T	T																T	T									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	S	P	A	S	S	D	D	P	S	F	A	E	N	G	R	L	Y	D	N	G	N	L	L	G	G	Y	T	N	D	T	Q	N	L	F	H	H	Y	G	G	T	D	F	S	T	I	E	N	G	I	Y	K	N	L	Y	D	L	A	D	L	N	H	N	N	S	S	V	D	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S		T	T	S	T	T	T	T					T	T						S	T	T		T	T			B			S		B				S	S							S	B	S	T	T				B		T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	K	D	A	I	K	M	W	L	D	L	G	V	D	G	I	R	V	D	A	V	K	H	M	P	F	G	W	Q	K	S	F	M	A	T	I	N	N	Y	K	P	V	F	T	F	G	E	W	F	L	G	V	N	E	I	S	P	E	Y	H	Q	F	A	N	E	S	G	M	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T							T	T	G	G	G	S																S												T	T													S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	D	F	R	F	A	Q	K	A	R	Q	V	F	R	D	N	T	D	N	M	Y	G	L	K	A	M	L	E	G	S	E	V	D	Y	A	Q	V	N	D	Q	V	T	F	I	D	N	H	D	M	E	R	F	H	T	S	N	G	D	R	R	K	L	E	Q	A	L	A	F	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B													T	T		S	S																S	T	T	G	G	G					S			T	T	S			S			T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Sequence	T	S	R	G	V	P	A	I	Y	Y	G	S	E	Q	Y	M	S	G	G	N	D	P	D	N	R	A	R	L	P	S	F	S	T	T	T	T	A	Y	Q	V	I	Q	K	L	A	P	L	R	K	S	N	P	A	I	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S						T	T	G	G	G	T					S	T	T	G	G	G								S		S										T	T

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PDB structure

FASTA sequence

Hidden Markov model

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