Fold library entry viewer: d1p80a2

Added to library: Tue Mar 16 14:12:34 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	S	L	A	P	E	D	G	S	H	R	P	A	A	E	P	T	P	P	G	A	Q	P	T	A	P	G	S	L	K	A	P	D	T	R	N	E	K	L	N	S	L	E	D	V	R	K	G	S	E	N	Y	A	L	T	T	N	Q	G	V	R	I	A	D	D	Q	N	S	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		T	T	S			S	S				T	T	S	S										T	T									G	G	G	T					T	T				B		T	T	S		B		S		T	T				B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	G	S	R	G	P	T	L	L	E	D	F	I	L	R	E	K	I	T	H	F	D	H	E	R	I	P	E	R	I	V	H	A	R	G	S	A	A	H	G	Y	F	Q	P	Y	K	S	L	S	D	I	T	K	A	D	F	L	S	D	P	N	K	I	T	P	V	F	V	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T	S		B		T	T													T							S	S			S											S	S			T	T	T				G	G	G	S		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	T	V	Q	G	G	A	G	S	A	D	T	V	R	Q	I	R	G	F	A	T	K	F	Y	T	E	E	G	I	F	D	L	V	G	N	N	T	P	I	F	F	I	Q	D	A	H	K	F	P	D	F	V	H	A	V	K	P	E	P	H	W	A	I	P	Q	G	Q	S	A	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S		T	T	S		T	T	S	S	S											T	T									S	S	S	S		S		S		G	G	G									S			T	T	T				S	S				S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	T	F	W	D	Y	V	S	L	Q	P	E	T	L	H	N	V	M	W	A	M	S	D	R	G	I	P	R	S	Y	R	T	M	E	G	F	G	I	H	T	F	R	L	I	N	A	E	G	K	A	T	F	V	R	F	H	W	K	P	L	A	G	K	A	S	L	V	W	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											G	G	G									S	G	G	G	S	B	S		G	G	G	S						S							T	T													T	T				B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	Q	K	L	T	G	R	D	P	D	F	H	R	R	E	L	W	E	A	I	E	A	G	D	F	P	E	Y	E	L	G	F	Q	L	I	P	E	E	D	E	F	K	F	D	F	D	L	L	D	P	T	K	L	I	P	E	E	L	V	P	V	Q	R	V	G	K	M	V	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T													T														G	G	G	T	T		S	S	S		T	T		T	T					T	T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	N	P	D	N	F	F	A	E	N	E	Q	A	A	F	H	P	G	H	I	V	P	G	L	D	F	T	N	D	P	L	L	Q	G	R	L	F	S	Y	T	D	T	Q	I	S	R	L	G	G	P	N	F	H	E	I	P	I	N	R	P	T	C	P	Y	H	N	F	Q	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S						T	T	T					T	T				T	T																								T	S	S	T	T	G	G	G	S	G	G	G			S	S					S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	M	H	R	M	G	I	D	T	N	P	A	N	Y	E	P	N	S	I	N	D	N	W	P	R	E	T	P	P	G	P	K	R	G	G	F	E	S	Y	Q	E	R	V	E	G	N	K	V	R	E	R	S	P	S	F	G	E	Y	Y	S	H	P	R	L	F	W	L	S	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T								S		S	S	S	S		S	T	T	T	T		S							S	S	S																				G	G	G				S										S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	F	E	Q	R	H	I	V	D	G	F	S	F	E	L	S	K	V	V	R	P	Y	I	R	E	R	V	V	D	Q	L	A	H	I	D	L	T	L	A	Q	A	V	A	K	N	L	G	I	E	L	T	D	D	Q	L	N	I	T	P	P	P	D	V	N	G	L	K	K	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T		S	S													T	T													T									T							B	T	T	B	S			G
	.	.	.	.	.	.	.	.	.	570	.
Sequence	S	L	S	L	Y	A	I	P	D	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G		S	S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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