Fold library entry viewer: d1p30a1

Added to library: Tue Mar 16 13:15:40 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	M	P	Q	W	S	Y	M	H	I	S	G	Q	D	A	S	E	Y	L	S	P	G	L	V	Q	F	A	R	A	T	E	T	Y	F	S	L	N	N	K	F	R	N	P	T	V	A	P	T	H	D	V	T	T	D	R	S	Q	R	L	T	L	R	F	I	P	V	D	R	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S	S	S							S												T	T	T	S			G	G	G	S									S	S	S	B		S	S				S							S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	A	Y	S	Y	K	A	R	F	T	L	A	V	G	D	N	R	V	L	D	M	A	S	T	Y	F	D	I	R	G	V	L	D	R	G	P	T	F	K	P	Y	S	G	T	A	Y	N	A	L	A	P	K	G	A	P	N	P	C	E	W	D	T	H	V	F	G	Q	A	P	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S												T	T					G	G	G													T	T		B		S	S	S		S	S		T	T	S		T	T		B		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	G	I	N	I	T	K	E	G	I	Q	I	G	V	E	G	Q	T	P	K	Y	A	D	K	T	F	Q	P	E	P	Q	I	G	E	S	Q	W	Y	E	T	E	I	N	H	A	A	G	R	V	L	K	K	T	T	P	M	K	P	C	Y	G	S	Y	A	K	P	T	N	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S				T	T								T	T							T	T	T		S		T	T				S	S	S	S					S	S								T	T	S				B	S	T	T						S	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	G	Q	G	I	L	V	L	E	S	Q	V	E	M	Q	F	F	S	T	T	E	L	T	P	K	V	V	L	Y	S	E	D	V	D	I	E	T	P	D	T	H	I	S	Y	M	P	T	I	K	E	G	N	S	R	E	L	M	G	Q	Q	S	M	P	N	R	P	N	Y	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B																					S								B					T	T							S		S			S			G	G	G	G	G									B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	R	D	N	F	I	G	L	M	Y	Y	N	S	T	G	N	M	G	V	L	A	G	Q	A	S	Q	L	N	A	V	V	D	L	Q	D	R	N	T	E	L	S	Y	Q	L	L	L	D	S	I	G	D	R	T	R	Y	F	S	M	W	N	Q	A	V	D	S	Y	D	P	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	T	T	T	B			S		G	G	G							T	T	T				S					T	T															S		T	T	S		B	G	G	G	T	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	I	I	E	N	H	G	T	E	D	E	L	P	N	Y	C	F	P	L	G	G	V	I	N	T	E	T	L	T	K	V	K	P	G	W	E	K	D	A	F	S	D	K	N	E	I	R	V	G	N	N	F	A	M	E	I	N	L	N	A	N	L	W	R	N	F	L	Y	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S										S							T	T	S																					S							S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	A	L	Y	L	P	D	K	L	K	Y	S	P	S	N	V	K	I	S	D	N	P	N	T	Y	D	Y	M	N	K	R	V	V	A	P	G	L	V	D	C	Y	I	N	L	G	A	R	W	S	L	D	Y	M	D	N	V	N	P	F	N	H	H	R	N	A	G	L	R	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	G	G	G	S		G	G	G		B			T	T	S				S		T	T	S								B			G	G	G	G		T	T	T	T	T	T										T	S		T	T	S	S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	M	L	L	G	N	G	R	Y	V	P	F	H	I	Q	V	P	Q	K	F	F	A	I	K	N	L	L	L	L	P	G	S	Y	T	Y	E	W	N	F	R	K	D	V	N	M	V	L	Q	S	S	L	G	N	D	L	R	V	D	G	A	S	I	K	F	D	S	I	C	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S													T	T	T	T	T					S																				S	S				T	T	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
Sequence	A	T	F	F	P	M	A	H	N	T	A	S	T	L	E	A	M	L	R	N	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						B													T

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PDB structure

FASTA sequence

Hidden Markov model

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