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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | Fold | Superfamily | Family |
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d1ogqa_ | Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) | L domain-like | Polygalacturonase inhibiting protein PGIP |
Added to library: Tue Mar 16 13:08:41 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | E | L | C | N | P | Q | D | K | Q | A | L | L | Q | I | K | K | D | L | G | N | P | T | T | L | S | S | W | L | P | T | T | D | C | C | N | R | T | W | L | G | V | L | C | D | T | D | T | Q | T | Y | R | V | N | N | L | D | L | S | G | L | N | L | P | K | P | Y | P | I | P | S |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | G | G | G | T | T | T | T | S | T | T | T | T | S | T | T | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | G |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | S | L | A | N | L | P | Y | L | N | F | L | Y | I | G | G | I | N | N | L | V | G | P | I | P | P | A | I | A | K | L | T | Q | L | H | Y | L | Y | I | T | H | T | N | V | S | G | A | I | P | D | F | L | S | Q | I | K | T | L | V | T | L | D | F | S | Y | N | A | L | S | G | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | G | G | G | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | S | G | G | G | G | G | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | G | G | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | L | P | P | S | I | S | S | L | P | N | L | V | G | I | T | F | D | G | N | R | I | S | G | A | I | P | D | S | Y | G | S | F | S | K | L | F | T | S | M | T | I | S | R | N | R | L | T | G | K | I | P | P | T | F | A | N | L | N | L | A | F | V | D | L | S | R | N | M | L | E |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | G | G | G | G | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | G | G | G | G | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | G | G | S | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence | G | D | A | S | V | L | F | G | S | D | K | N | T | Q | K | I | H | L | A | K | N | S | L | A | F | D | L | G | K | V | G | L | S | K | N | L | N | G | L | D | L | R | N | N | R | I | Y | G | T | L | P | Q | G | L | T | Q | L | K | F | L | H | S | L | N | V | S | F | N | N | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | G | G | G | T | T | S | S | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | B | G | G | G | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | G | G | G | G | G | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . |
Sequence | C | G | E | I | P | Q | G | G | N | L | Q | R | F | D | V | S | A | Y | A | N | N | K | C | L | C | G | S | P | L | P | A | C | T | |||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | S | T | T | G | G | G | S | G | G | G | T | S | S | S | ![]() | ![]() | ![]() | S | T | T | S | S |
Download: | PDB structure | FASTA sequence |
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