Fold library entry viewer: d1ocka_

Added to library: Tue Mar 16 14:23:57 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	I	S	L	A	D	L	Q	R	R	I	E	T	G	E	L	S	P	N	A	A	I	A	Q	S	H	A	A	I	E	A	R	E	K	E	V	H	A	F	V	R	H	D	K	S	A	R	A	Q	A	S	G	P	L	R	G	I	A	V	G	I	K	D	I	I	D	T	A	N	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	S	S																												T	T					S	S	S	T	T	T	T							T	T	B			S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	T	E	M	G	S	E	I	Y	R	G	W	Q	P	R	S	D	A	P	V	V	M	M	L	K	R	A	G	A	T	I	I	G	K	T	T	T	T	A	F	A	S	R	D	P	T	A	T	L	N	P	H	N	T	G	H	S	P	G	G	S	S	S	G	S	A	A	A	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S	G	G	G	T	T				S	S											T	T											G	G	G	S	S				S			B	T	T	B	T	T	B				S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	G	M	I	P	L	A	L	G	T	Q	T	G	G	S	V	I	R	P	A	A	Y	C	G	T	A	A	I	K	P	S	F	R	M	L	P	T	V	G	V	K	C	Y	S	W	A	L	D	T	V	G	L	F	G	A	R	A	E	D	L	A	R	G	L	L	A	M	T	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S		S							S	S	S	T	T								T							S	T	T	S	S			T	T	B			S		T	T	T								S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	E	F	S	G	I	V	P	A	K	A	P	R	I	G	V	V	R	Q	E	F	A	G	A	V	E	P	A	A	E	Q	G	L	Q	A	A	I	K	A	A	E	R	A	G	A	S	V	Q	A	I	D	L	P	E	A	V	H	E	A	W	R	I	H	P	I	I	Q	D	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	S	S					S	S									G	G	G																					T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	H	R	A	L	A	W	E	F	S	E	H	H	D	E	I	A	P	M	L	R	A	S	L	D	A	T	V	G	L	T	P	K	E	Y	D	E	A	R	R	I	G	R	R	G	R	R	E	L	G	E	V	F	E	G	V	D	V	L	L	T	Y	S	A	P	G	T	A	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T							S	G	G	G	S											T	T	T																								T	T	T		S						S	S	S	S	S			B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Sequence	K	A	L	A	S	T	G	D	P	R	Y	N	R	L	W	T	L	M	G	N	P	C	V	N	V	P	V	L	K	V	G	G	L	P	I	G	V	Q	V	I	A	R	F	G	N	D	A	H	A	L	A	T	A	W	F	L	E	D	A	L	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G							T	T	T																			T	T											T	T																	T

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PDB structure

FASTA sequence

Hidden Markov model

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