PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1o63a_

Fold library id	Fold	Superfamily	Family
d1o63a_	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like

Links to external resources
Added to library: Tue Mar 16 14:23:43 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L K L A I P K G R L E E K V X T Y L K K T G V I F E R E S S I L R E G K D I V C F X V R P F D V P T Y L V H G V A D I G F C G T D V L L E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T
S S T T
G G G T T S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E T S L I Q P F F I P T N I S R X V L A G P K G R G I P E G E K R I A T K F P N V T Q R Y C E S K G W H C R I I P L K G S V E L A P I A G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S T T T
S S
S
T
S S
T T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . .

Sequence S D L I V D I T E T G R T L K E N N L E I L D E I F V I R T H V V V N P V S Y R T K R E E V V S F L E K L Q E V I E H D S N E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S T T
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	K	L	A	I	P	K	G	R	L	E	E	K	V	X	T	Y	L	K	K	T	G	V	I	F	E	R	E	S	S	I	L	R	E	G	K	D	I	V	C	F	X	V	R	P	F	D	V	P	T	Y	L	V	H	G	V	A	D	I	G	F	C	G	T	D	V	L	L	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	T	T												T								S	S					T	T								G	G	G							T	T	S		S												S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	T	S	L	I	Q	P	F	F	I	P	T	N	I	S	R	X	V	L	A	G	P	K	G	R	G	I	P	E	G	E	K	R	I	A	T	K	F	P	N	V	T	Q	R	Y	C	E	S	K	G	W	H	C	R	I	I	P	L	K	G	S	V	E	L	A	P	I	A	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B			S															T	T	T				S	S							S													T									S	S		T	T						T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Sequence	S	D	L	I	V	D	I	T	E	T	G	R	T	L	K	E	N	N	L	E	I	L	D	E	I	F	V	I	R	T	H	V	V	V	N	P	V	S	Y	R	T	K	R	E	E	V	V	S	F	L	E	K	L	Q	E	V	I	E	H	D	S	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S							S	S	S						T	T																								T