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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1nowa1

Fold library idFoldSuperfamilyFamily
d1nowa1TIM beta/alpha-barrel(Trans)glycosidasesbeta-N-acetylhexosaminidase catalytic domain


Added to library: Tue Mar 16 12:35:12 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FSHRGILIDTSRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGSYSLSHVYTPN
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Known secondary structure (DSSP)

SSSS


TT




SS


B

SS
SSSTTS
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence DVRMVIEYARLRGIRVLPEFDTPGHTLSWGKGQKDLLTPCYSLDSFGPINPTLNTTYSFLTTFFKEISEV
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Known secondary structure (DSSP) TT
SSS
TTSTT





S
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FPDQFIHLGGDEVEFKCWESNPKIQDFMRQKGFGTDFKKLESFYIQKVLDIIATINKGSIVWQEVFDDKA
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Known secondary structure (DSSP)

SS

S


T
TT
TT
TT
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KLAPGTIVEVWKDSAYPEELSRVTASGFPVILSAPWYLDLISYGQDWRKYYKVEPLDFGGTQKQKQLFIG
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Known secondary structure (DSSP)


TT



TTTT


TT
BTTS

SS
T

TT
SS

T
 .........290.........300.........310.........320.........330.........340.........
Sequence GEACLWGEYVDATNLTPRLWPRASAVGERLWSSKDVRDMDDAYDRLTRHRCRMVERGIAAQPLYAGYCN
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Known secondary structure (DSSP)
STT
STTTTTS
TT


TT




SSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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