Fold library entry viewer: d1novc_

Added to library: Tue Mar 16 14:05:30 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	R	R	A	A	P	R	Q	Q	Q	R	Q	Q	S	N	R	A	L	K	M	S	A	P	G	L	D	F	L	K	C	A	F	A	S	P	D	F	S	T	D	P	G	K	G	I	P	D	K	F	Q	G	L	V	L	P	K	K	H	C	L	T	Q	S	I	T	F	T	P	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T						T	S																								G	G	G				S							S	S			S																	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	T	M	L	L	V	A	P	I	P	G	I	A	C	L	K	A	E	A	N	V	G	A	S	F	S	G	V	P	L	A	S	V	E	F	P	G	F	D	Q	L	F	G	T	S	A	T	D	T	A	A	N	V	T	A	F	R	Y	A	S	M	A	A	G	V	Y	P	T	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S										T	T				S	S									S						T		S	S	G	G	G	G	G	G	T							S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	M	Q	F	A	G	S	I	Q	V	Y	K	I	P	L	K	Q	V	L	N	S	Y	S	Q	T	V	A	T	V	P	P	T	N	L	A	Q	N	T	I	A	I	D	G	L	E	A	L	D	A	L	P	N	N	N	Y	S	G	S	F	I	E	G	C	Y	S	Q	S	V	C	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T																									S	S	S												T	T	G	G	G	G	G				S	S						T	T	S								B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	P	E	F	E	F	H	P	I	M	E	G	Y	A	S	V	P	P	A	N	V	T	N	A	Q	A	S	M	F	T	N	L	T	F	S	G	A	R	Y	T	G	L	G	D	M	D	A	I	A	I	L	V	T	T	P	T	G	A	V	N	T	A	V	L	K	V	W	A	C	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S									S		S	B	S	S		T	T			T	T	T	T	T		S	S					S	S	S							S	B											T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Sequence	E	Y	R	P	N	P	N	S	T	L	Y	E	F	A	R	E	S	P	A	N	D	E	Y	A	L	A	A	Y	R	K	I	A	R	D	I	P	I	A	V	A	C	K	D	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S	S	G	G	G	G																						S		S				G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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