PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1ndba2

Fold library id	Fold	Superfamily	Family
d1ndba2	CoA-dependent acyltransferases	CoA-dependent acyltransferases	Choline/Carnitine O-acyltransferase

Links to external resources
Added to library: Tue Mar 16 13:35:11 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D L D I X X L T F H H F G K D F P K S E K L S P D A F I Q V A L Q L A Y Y R I Y G Q A C A T Y E S A S L R X F H L G R T D T I R S A S I D S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S T T
S S
T T S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L A F V K G X G D S T V P E Q Q K V E L L R K A V Q A H R A Y T D R A I R G E A F D R H L L G L K L Q A I E D L V S X P D I F X D T S Y A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T
S T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A X H F N L S T S Q V P A K T D C V X F F G P V V P D G Y G I C Y N P X E A H I N F S V S A Y N S C A E T N A A R X A H Y L E K A L L D X R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S S S
S S T T
S S
T T
T T

. . . . . . . . . 220

Sequence T L L Q N H P R A K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	L	D	I	X	X	L	T	F	H	H	F	G	K	D	F	P	K	S	E	K	L	S	P	D	A	F	I	Q	V	A	L	Q	L	A	Y	Y	R	I	Y	G	Q	A	C	A	T	Y	E	S	A	S	L	R	X	F	H	L	G	R	T	D	T	I	R	S	A	S	I	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S			S						T	T																				S	S											T	T	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	A	F	V	K	G	X	G	D	S	T	V	P	E	Q	Q	K	V	E	L	L	R	K	A	V	Q	A	H	R	A	Y	T	D	R	A	I	R	G	E	A	F	D	R	H	L	L	G	L	K	L	Q	A	I	E	D	L	V	S	X	P	D	I	F	X	D	T	S	Y	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S																									T	T			S														T	T									S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	X	H	F	N	L	S	T	S	Q	V	P	A	K	T	D	C	V	X	F	F	G	P	V	V	P	D	G	Y	G	I	C	Y	N	P	X	E	A	H	I	N	F	S	V	S	A	Y	N	S	C	A	E	T	N	A	A	R	X	A	H	Y	L	E	K	A	L	L	D	X	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T			S									S	S	S								S	S	T	T										S	S										T	T		T	T
	.	.	.	.	.	.	.	.	.	220
Sequence	T	L	L	Q	N	H	P	R	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	S		S