Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1nd7a_

Fold library idFoldSuperfamilyFamily
d1nd7a_Hect, E3 ligase catalytic domainHect, E3 ligase catalytic domainHect, E3 ligase catalytic domain


Added to library: Tue Mar 16 13:28:32 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HMGFRWKLAHFRYLCQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAR
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)

TT

SS
TTTTS
GGGGGSTTT




T
 .........80.........90.........100.........110.........120.........130.........140
Sequence EWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFY
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) T
GGGSSSSSSS


GGGGGSTTTT







 .........150.........160.........170.........180.........190.........200.........210
Sequence KRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENK
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TT



TT
SS
S
SS



BS


SSTT


SSTTGGG
B

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRHYTR
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TTTS
GGGGTT







TS

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence NSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEKVGKDTWLPRSHTCFNR
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) TSS
S
S


TT
GGG
TT



S
TTS

GGGT
 .........360.........370....
Sequence LDLPPYKSYEQLKEKLLFAIEETE
Predicted secondary structure







SS confidence























Known secondary structure (DSSP)



SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D