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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1ncqc_

Fold library idFoldSuperfamilyFamily
d1ncqc_Nucleoplasmin-like/VP (viral coat and capsid proteins)Positive stranded ssRNA virusesPicornaviridae-like VP (VP1, VP2, VP3 and VP4)


Added to library: Tue Mar 16 12:59:41 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GLPTTTLPGSGQFLTTDDRQSPSALPNYEPTPRIHIPGKVHNLLEIIQVDTLIPMNNTHTKDEVNSYLIP
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Known secondary structure (DSSP)






TTTT


TT






SSTT








S




TTS




TTSSS

GGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LNANRQNEQVFGTNLFIGDGVFKTTLLGEIVQYYTHWSGSLRFSLMYTGPALSSAKLILAYTPPGARGPQ
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Known secondary structure (DSSP)
BT

S


TTSGGGGGSTTS

S
TT
B

TTS


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence DRREAMLGTHVVWDIGLQSTIVMTIPWTSGVQFRYTDPDTYTSAGFLSCWYQTSLILPPETTGQVYLLSF
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Known secondary structure (DSSP) STS
SSS




SSS
SS

STT


SS
BB

TT

S
 .........220.........230......
Sequence ISACPDFKLRLMKDTQTISQTVALTE
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Known secondary structure (DSSP)
TT



SS


SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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