Fold library entry viewer: d1n8pa_

Added to library: Tue Mar 16 12:42:24 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	L	Q	E	S	D	K	F	A	T	K	A	I	H	A	G	E	H	V	D	V	H	G	S	V	I	E	P	I	S	L	S	T	T	F	K	Q	S	S	P	A	N	P	I	G	T	Y	E	Y	S	R	S	Q	N	P	N	R	E	N	L	E	R	A	V	A	A	L	E	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S										T	T					S	S			S	S							S	B			B	S	S	S	S	S	B	S	S	S			B	T	T	T																T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	Y	G	L	A	F	S	S	G	S	A	T	T	A	T	I	L	Q	S	L	P	Q	G	S	H	A	V	S	I	G	D	V	Y	G	G	T	H	R	Y	F	T	K	V	A	N	A	H	G	V	E	T	S	F	T	N	D	L	L	N	D	L	P	Q	L	I	K	E	N	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						S												T	S		S	S							S	S												T	S	T	T	T		S						S	S									S		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	V	W	I	E	T	P	T	N	P	T	L	K	V	T	D	I	Q	K	V	A	D	L	I	K	K	H	A	A	G	Q	D	V	I	L	V	V	D	N	T	F	L	S	P	Y	I	S	N	P	L	N	F	G	A	D	I	V	V	H	S	A	T	K	Y	I	N	G	H	S	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S		T	T	T																	T	T	T	T	T								T	T	T							G	G	G	G	T		S						T	T	T	T	T	T		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	V	L	G	V	L	A	T	N	N	K	P	L	Y	E	R	L	Q	F	L	Q	N	A	I	G	A	I	P	S	P	F	D	A	W	L	T	H	R	G	L	K	T	L	H	L	R	V	R	Q	A	A	L	S	A	N	K	I	A	E	F	L	A	A	D	K	E	N	V	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S																																T	T																				T	S		T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	N	Y	P	G	L	K	T	H	P	N	Y	D	V	V	L	K	Q	H	R	D	A	L	G	G	G	M	I	S	F	R	I	K	G	G	A	E	A	A	S	K	F	A	S	S	T	R	L	F	T	L	A	E	S	L	G	G	I	E	S	L	L	E	V	P	A	V	M	T	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S	T	T	S	T	T								S	G	G	G				S							S	S													S	S	S				S					S	S						T	T	T	T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Sequence	G	G	I	P	K	E	A	R	E	A	S	G	V	F	D	D	L	V	R	I	S	V	G	I	E	D	T	D	D	L	L	E	D	I	K	Q	A	L	K	Q	A	T	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		T	T	T	T	T	T	T	S			T	T								S	S

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PDB structure

FASTA sequence

Hidden Markov model

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