Fold library entry viewer: d1n8ia_

Added to library: Tue Mar 16 13:30:28 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	D	R	V	S	V	G	N	L	R	I	A	R	V	L	Y	D	F	V	N	N	E	A	L	P	G	T	D	I	D	P	D	S	F	W	A	G	V	D	K	V	V	A	D	L	T	P	Q	N	Q	A	L	L	N	A	R	D	E	L	Q	A	Q	I	D	K	W	H	R	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T														T	T	S	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	D	A	Y	R	Q	F	L	T	E	I	G	Y	L	L	P	E	P	D	D	F	T	I	T	T	S	G	V	D	A	E	I	T	T	T	A	G	P	Q	L	V	V	P	V	L	N	A	R	F	A	L	N	A	A	N	A	R	W	G	S	L	Y	D	A	L	Y	G	T	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S	S													S							T										T	T										G	G	G										S	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	P	E	T	D	G	A	E	K	G	P	T	Y	N	K	V	R	G	D	K	V	I	A	Y	A	R	K	F	L	D	D	S	V	P	L	S	S	G	S	F	G	D	A	T	G	F	T	V	Q	D	G	Q	L	V	V	A	L	P	D	K	S	T	G	L	A	N	P	G	Q	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				T	T					S	S																					S		B	S	S	S		G	G	G								T	T							S	S					B	S	S	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	G	Y	T	G	A	A	E	S	P	T	S	V	L	L	I	N	H	G	L	H	I	E	I	L	I	D	P	E	S	Q	V	G	T	T	D	R	A	G	V	K	D	V	I	L	E	S	A	I	T	T	I	M	D	F	E	D	S	V	A	A	V	D	A	A	D	K	V	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T										T	T									T	T	S	T	T	G	G	G	S	T	T											S						S	S	T	T					S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	R	N	W	L	G	L	N	K	G	D	L	A	A	R	V	L	N	R	D	R	N	Y	T	A	P	G	G	G	Q	F	T	L	P	G	R	S	L	M	F	V	R	N	V	G	H	L	M	T	N	D	A	I	V	D	T	D	G	S	E	V	F	E	G	I	M	D	A	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T			B			B										T	T	S							S	S										S	S									T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	G	L	I	A	I	H	G	L	K	A	S	D	I	N	S	R	T	G	S	I	Y	I	V	K	P	K	M	H	G	P	A	E	V	A	F	T	C	E	L	F	S	R	V	E	D	V	L	G	L	P	Q	N	T	M	K	I	G	I	M	D	E	E	R	R	T	T	V	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G	G	S							S	S	S								S			S																			T			T	T										S					T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	A	C	I	K	A	A	A	D	R	V	V	F	I	N	T	G	F	L	D	R	T	G	D	E	I	H	T	S	M	E	A	G	P	M	V	R	K	G	T	M	K	S	Q	P	W	I	L	A	Y	E	D	H	N	V	D	A	G	L	A	A	G	F	S	G	R	A	Q	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T																			T	G	G	G			B			G	G	G	G	G	G	S																	T	T		T	T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	G	M	W	T	M	T	E	L	M	A	D	M	V	E	T	K	I	A	Q	P	R	A	G	A	S	T	A	W	V	P	S	P	T	A	A	T	L	H	A	L	H	Y	H	Q	V	D	V	A	A	V	Q	Q	G	L	A	G	K	R	R	A	T	I	E	Q	L	L	T	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T									T	T					T	T		S					S	S														S										T	T										T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	A	K	E	L	A	W	A	P	D	E	I	R	E	E	V	D	N	N	C	Q	S	I	L	G	Y	V	V	R	W	V	D	Q	G	V	G	C	S	K	V	P	D	I	H	D	V	A	L	M	E	D	R	A	T	L	R	I	S	S	Q	L	L	A	N	W	L	R	H	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B			T	T																															S							T	T																								T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	I	T	S	A	D	V	R	A	S	L	E	R	M	A	P	L	V	D	R	Q	N	A	Y	R	P	M	A	P	N	F	D	D	S	I	A	F	L	A	A	Q	E	L	I	L	S	G	A	Q	Q	P	N	G	Y	T	E	P	I	L	H	R	R	R	R	E	F	K	A	R	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																											S		G	G	G													T	G	G	G	S	G	G	G		S
	.
Sequence	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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