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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1mqta_

Fold library idFoldSuperfamilyFamily
d1mqta_Nucleoplasmin-like/VP (viral coat and capsid proteins)Positive stranded ssRNA virusesPicornaviridae-like VP (VP1, VP2, VP3 and VP4)


Added to library: Tue Mar 16 12:44:17 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RVADTVGSGPVNSESIPALTAAETGHTSQVVPSDTMQTRHVKNYHSRSESTVENFLCRSACVFYTTYKNH
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Known secondary structure (DSSP)



B

B



SS

TT


GGG






TTSSS
B

B





GGGS
S
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DSDGDNFAYWVINARQVAQLRRKLEMFTYARFDLELTFVITSTQEQSTTQGQDTPVLTHQIMYVPPGGPV
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Known secondary structure (DSSP)
TTS



S
S
TT





S






TTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence PTKVNSYSWQTSTNPSVFWTEGNAPPRMSIPFIGIGNAYSMFYDGWARFDKQGTYGISTLNSMGTLYMRH
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Known secondary structure (DSSP)

STT
GGGG
SSS
TTS






SSSSS


SBSSTTS
S
BSGGGT



 .........220.........230.........240.........250.........260.........270.
Sequence VNGGGPGPIVSTVRIYFKPKHVKTWVPRPPRLCQYKKAGNVNFIPTSVTEGRTDITTMKTT
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Known secondary structure (DSSP) SS

SSS






S



SSS






SS


SSTT
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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