PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1ma3a_

Fold library id	Fold	Superfamily	Family
d1ma3a_	DHS-like NAD/FAD-binding domain	DHS-like NAD/FAD-binding domain	Sir2 family of transcriptional regulators

Links to external resources
Added to library: Tue Mar 16 13:21:23 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M E D E I R K A A E I L A K S K H A V V F T G A G I S A E G L W R K Y D P E E V A S I S G F K R N P R A F W E F S M E M K D K L F A E P N P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
G G G S
S
S S
T B T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A H Y A I A E L E R M G I V K A V I T Q N I D M L H Q R A G S R R V L E L H G S M D K L D C L D C H E T Y D W S E F V E D F N K G E I P R C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
S
T
S T T T T T
G G G T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R K C G S Y Y V K P R V V L F G E P L P Q R T L F E A I E E A K H C D A F M V V G S S L V V Y P A A E L P Y I A K K A G A K M I I V N A E P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
B T S
S S
S
S T T G G G T
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . .

Sequence T M A D P I F D V K I I G K A G E V L P K I V E E V K R L R S E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T G G G
S S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	E	D	E	I	R	K	A	A	E	I	L	A	K	S	K	H	A	V	V	F	T	G	A	G	I	S	A	E	G	L	W	R	K	Y	D	P	E	E	V	A	S	I	S	G	F	K	R	N	P	R	A	F	W	E	F	S	M	E	M	K	D	K	L	F	A	E	P	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S							G	G	G	S					S		S	S						T	B					T	T												T					T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	H	Y	A	I	A	E	L	E	R	M	G	I	V	K	A	V	I	T	Q	N	I	D	M	L	H	Q	R	A	G	S	R	R	V	L	E	L	H	G	S	M	D	K	L	D	C	L	D	C	H	E	T	Y	D	W	S	E	F	V	E	D	F	N	K	G	E	I	P	R	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S							S			S							T			S				T	T									T	T	T						G	G	G	T						T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	K	C	G	S	Y	Y	V	K	P	R	V	V	L	F	G	E	P	L	P	Q	R	T	L	F	E	A	I	E	E	A	K	H	C	D	A	F	M	V	V	G	S	S	L	V	V	Y	P	A	A	E	L	P	Y	I	A	K	K	A	G	A	K	M	I	I	V	N	A	E	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T			S									B	T	S																		S						S			S		S	T	T	G	G	G									T								S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Sequence	T	M	A	D	P	I	F	D	V	K	I	I	G	K	A	G	E	V	L	P	K	I	V	E	E	V	K	R	L	R	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	G	G	G		S					S																	T