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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1m72a_

Fold library idFoldSuperfamilyFamily
d1m72a_Caspase-likeCaspase-likeCaspase catalytic domain


Added to library: Tue Mar 16 13:35:35 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RVARMPVDRNAPYYNMNHKHRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFKVTVFPNLKSE
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Known secondary structure (DSSP)





S
TT
SB



SS



SSTT



TTTT
S

 .........80.........90.........100.........110.........120.........130.........140
Sequence EINKFIQQTAEMDHSDADCLLVAVLTHGELGMLYAKDTHYKPDNLWYYFTADKCPTLAGKPKLFFIQACQ
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Known secondary structure (DSSP) TS

TTS
TT
SSS
TTTTSTTT
GGGTTS
S
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence GDRLDGGITLSRSYRIPVHADFLIAFSTVPGYFSWRNTTRGSWFMQALCEELRYAGTERDILTLLTFVCQ
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Known secondary structure (DSSP) SSB
B











TT
SSS
TTB


TTTTTTS
 .........220.........230.........240.......
Sequence KVALDFESNAPDSAMMHQQKQVPCITSMLTRLLVFGK
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Known secondary structure (DSSP)




TT
GGGTT
B




SSB





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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