Fold library entry viewer: d1ldja2

Added to library: Tue Mar 16 13:35:24 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	D	Q	I	W	D	D	L	R	A	G	I	Q	Q	V	Y	T	R	Q	S	M	A	K	S	R	Y	M	E	L	Y	T	H	V	Y	N	Y	C	T	S	V	G	L	E	L	Y	K	R	L	K	E	F	L	K	N	Y	L	T	N	L	L	K	D	G	E	D	L	M	D	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T																				T				T	T																				T	T		S		T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	L	K	F	Y	T	Q	Q	W	E	D	Y	R	F	S	S	K	V	L	N	G	I	C	A	Y	L	N	R	H	W	V	R	R	E	C	Y	E	I	Y	S	L	A	L	V	T	W	R	D	C	L	F	R	P	L	N	K	Q	V	T	N	A	V	L	K	L	I	E	K	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T							S	S	S													T	T					T	T	T	T	T	T											T	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	G	E	T	I	N	T	R	L	I	S	G	V	V	Q	S	Y	V	E	L	G	L	N	E	D	D	A	F	A	K	G	P	T	L	T	V	Y	K	E	S	F	E	S	Q	F	L	A	D	T	E	R	F	Y	T	R	E	S	T	E	F	L	Q	Q	N	P	V	T	E	Y	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			T													T	S			S	S	S	S	S		S	S										T																							S		T	T	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	K	A	E	A	R	L	L	E	E	Q	R	R	V	Q	V	Y	L	H	E	S	T	Q	D	E	L	A	R	K	C	E	Q	V	L	I	E	K	H	L	E	I	F	H	T	E	F	Q	N	L	L	D	A	D	K	N	E	D	L	G	R	M	Y	N	L	V	S	R	I	Q	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	T	T	T	T		S	S	S	S												S	S	S	S	S													S			T	T												S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	L	G	E	L	K	K	L	L	E	T	H	I	H	N	Q	G	L	A	A	I	E	K	C	G	E	A	A	L	N	D	P	K	M	Y	V	Q	T	V	L	D	V	H	K	K	Y	N	A	L	V	M	S	A	F	N	N	D	A	G	F	V	A	A	L	D	K	A	C	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T	T	S	G	G	G																						T	T	T	T	T
	.	.	.	.	.	.	.	.	.
Sequence	F	I	N	N	N	A	V	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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