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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | Fold | Superfamily | Family |
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d1lcsa_ | ENV polyprotein, receptor-binding domain | ENV polyprotein, receptor-binding domain | ENV polyprotein, receptor-binding domain |
Added to library: Tue Mar 16 14:07:32 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | P | H | Q | V | Y | N | V | T | W | T | I | T | N | L | V | T | G | T | K | A | N | A | T | S | M | L | G | T | L | T | D | A | F | P | T | M | Y | F | D | L | C | D | I | I | G | N | T | W | N | P | S | D | Q | E | P | F | P | G | Y | G | C | D | Q | P | M | R | R | W | Q | Q |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | G | G | G | T | T | T | T | S | T | T | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | R | N | T | P | F | Y | V | C | P | G | H | A | N | R | K | Q | C | G | G | P | Q | D | G | F | C | A | V | W | G | C | E | T | T | G | E | T | Y | W | R | P | T | S | S | W | D | Y | I | T | V | K | K | G | V | T | Q | G | I | Y | Q | C | S | G | G | G | W | C | G | P | C | Y |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | G | G | G | G | G | G | T | T | S | S | T | T | ![]() | ![]() | ![]() | S | T | T | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | ![]() | ![]() | S | T | T | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
Sequence | D | K | A | V | H | S | S | T | T | G | A | S | E | G | G | R | C | N | P | L | I | L | Q | F | T | Q | K | G | R | Q | T | S | W | D | G | P | K | S | W | G | L | R | L | Y | R | S | G | Y | D | P | I | A | L | F | S | V | S | R | Q | V | M | T | I | T | P | |||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | T | T | T | S | T | T | S | T | T | B | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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