Fold library entry viewer: d1koba_

Added to library: Tue Mar 16 13:35:53 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	N	D	Y	D	K	F	Y	E	D	I	W	K	K	Y	V	P	Q	P	V	E	V	K	Q	G	S	V	Y	D	Y	Y	D	I	L	E	E	L	G	S	G	A	F	G	V	V	H	R	C	V	E	K	A	T	G	R	V	F	V	A	K	F	I	N	T	P	Y	P	L	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	G	G	G																B		S		G	G	G	T											T	T									T	T	T													S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	T	V	K	N	E	I	S	I	M	N	Q	L	H	H	P	K	L	I	N	L	H	D	A	F	E	D	K	Y	E	M	V	L	I	L	E	F	L	S	G	G	E	L	F	D	R	I	A	A	E	D	Y	K	M	S	E	A	E	V	I	N	Y	M	R	Q	A	C	E	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T			S	T	T	B										S	S													B					T	T		T	T			B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	H	M	H	E	H	S	I	V	H	L	D	I	K	P	E	N	I	M	C	E	T	K	K	A	S	S	V	K	I	I	D	F	G	L	A	T	K	L	N	P	D	E	I	V	K	V	T	T	A	T	A	E	F	A	A	P	E	I	V	D	R	E	P	V	G	F	Y	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T								G	G	G				S	S	T	T										T	T						T	T	S							S	S	G	G	G							T	T			B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	M	W	A	I	G	V	L	G	Y	V	L	L	S	G	L	S	P	F	A	G	E	D	D	L	E	T	L	Q	N	V	K	R	C	D	W	E	F	D	E	D	A	F	S	S	V	S	P	E	A	K	D	F	I	K	N	L	L	Q	K	E	P	R	K	R	L	T	V	H	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S			S	S			S	S																	S	S	T	T	T	T	S										T	T	S		S	S	G	G	G	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	E	H	P	W	L	K	G	D	H	S	N	L	T	S	R	I	P	S	S	R	Y	N	K	I	R	Q	K	I	K	E	K	Y	A	D	W	P	A	P	Q	P	A	I	G	R	I	A	N	F	S	S	L	R	K	H	R	P	Q	E	Y	Q	I	Y	D	S	Y	F	D	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	S	T	T	T	S	S			T	T					B		G	G	G	G									T	T	T	T	T	S				S	S	G	G	G	G	G	G	G			G	G	G	G	G						T						B		T	T
	.	.	.
Sequence	E	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S

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PDB structure

FASTA sequence

Hidden Markov model

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