Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1knba_

Fold library idFoldSuperfamilyFamily
d1knba_Virus attachment protein globular domainVirus attachment protein globular domainAdenovirus fiber protein "knob" domain


Added to library: Tue Mar 16 12:41:46 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NDKLTLWTTPAPSPNCRLNAEKDAKLTLVLTKCGSQILATVSVLAVKGSLAPISGTVQSAHLIIRFDENG
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)

TTS
SS

S
B
SSSTT
TT
STTBTTB
TT
S
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VLLNNSFLDPEYWNFRNGDLTEGTAYTNAVGFMPNLSAYPKSHGKTAKSNIVSQVYLNGDKTKPVTLTIT
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP)
B
TT
SB
GGG
TT
SS

S

GGGSB
TTTS
TT
TTSGGGBTT
TTS
 .........150.........160.........170.........180......
Sequence LNGTQETGDTTPSAYSMSFSWDWSGHNYINEIFATSSYTFSYIAQE
Predicted secondary structure





















SS confidence













































Known secondary structure (DSSP) S




SSS


S
TT


TTS

BB

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D