PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1k4ma_

Fold library id	Fold	Superfamily	Family
d1k4ma_	Adenine nucleotide alpha hydrolase-like	Nucleotidylyl transferase	Adenylyltransferase

Links to external resources
Added to library: Tue Mar 16 14:10:06 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K S L Q A L F G G T F D P V H Y G H L K P V E T L A N L I G L T R V T I I P N N V P P H R P Q P E A N S V Q R K H M L E L A I A D K P L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T
S
S S
T T S
S S
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T L D E R E L K R N A P S Y T A Q T L K E W R Q E Q G P D V P L A F I I G Q D S L L T F P T W Y E Y E T I L D N A H L I V C R R P G Y P L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S
G G G S T T
T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence M A Q P Q Y Q Q W L E D H L T H N P E D L H L Q P A G K I Y L A E T P W F N I S A T I I R E R L Q N G E S C E D L L P E P V L T Y I N Q Q G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S B
S
T T S S S
T T
T T T S
T

. . .

Sequence L Y R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	S	L	Q	A	L	F	G	G	T	F	D	P	V	H	Y	G	H	L	K	P	V	E	T	L	A	N	L	I	G	L	T	R	V	T	I	I	P	N	N	V	P	P	H	R	P	Q	P	E	A	N	S	V	Q	R	K	H	M	L	E	L	A	I	A	D	K	P	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T																	T		S								S	S		T	T	S				S	S														T	T		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	L	D	E	R	E	L	K	R	N	A	P	S	Y	T	A	Q	T	L	K	E	W	R	Q	E	Q	G	P	D	V	P	L	A	F	I	I	G	Q	D	S	L	L	T	F	P	T	W	Y	E	Y	E	T	I	L	D	N	A	H	L	I	V	C	R	R	P	G	Y	P	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S																	T	T	S														G	G	G	S	T	T																T	T			S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	M	A	Q	P	Q	Y	Q	Q	W	L	E	D	H	L	T	H	N	P	E	D	L	H	L	Q	P	A	G	K	I	Y	L	A	E	T	P	W	F	N	I	S	A	T	I	I	R	E	R	L	Q	N	G	E	S	C	E	D	L	L	P	E	P	V	L	T	Y	I	N	Q	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S											B		S		T	T					S	S	S																								T	T				T	T	T	S												T
	.	.	.
Sequence	L	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T