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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1jw1a2

Fold library idFoldSuperfamilyFamily
d1jw1a2Periplasmic binding protein-like IIPeriplasmic binding protein-like IITransferrin


Added to library: Tue Mar 16 13:03:37 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TAEEVKARCTRVVWCAVGPEEQSKCQQWSEQSGQNVTCATASTTDDCIALVLKGEADALSLDGGYIYTAG
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Known secondary structure (DSSP)

SSSSTTTS



SSSTTTTGGGTTTTSSSS


SSSSSTTTTS

B

TSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KCGLVPVMAENRKSSKHSSLDCVLRPTEGYLAVAVVKKANEGLTWNSLKGKKSCHTAVDRTAGWNIPMGL
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Known secondary structure (DSSP) SSS





B

STTTTS
STTS




B

TT
TT
SGGG
TTS


BSSSS
TTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence IANQTGSCAFDEFFSQSCAPGADPKSSLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFV
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Known secondary structure (DSSP) TTTTT



SSS


TTS
TTSSSSTT


SSSS
S
S
SSTTSTT
STTTTTTSTTTTS
S

B
 .........220.........230.........240.........250.........260.........270.........280
Sequence KNDTVWENTNGESSADWAKNLNREDFRLLCLDGTTKPVTEAQSCYLAVAPNHAVVSRSDRAAHVEQVLLH
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Known secondary structure (DSSP) SSSSS
SS
TTSSS

GGG
BB

TTS


BSS
TTT

S





TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence QQALFGKNGKNCPDKFCLFKSETKNLLFNDNTECLAKLGGRPTYEKYLGTEYVTAIANLKKCSTSPLLEA
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Known secondary structure (DSSP) TTTSSTT
TTTTTT

SS

TTT
SSS
SSB




S


S
TTS


TTTTS
 ......
Sequence CAFLTR
Predicted secondary structure

SS confidence





Known secondary structure (DSSP) SSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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