Fold library entry viewer: d1jv2a4

Added to library: Tue Mar 16 12:06:00 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	N	L	D	V	D	S	P	A	E	Y	S	G	P	E	G	S	Y	F	G	F	A	V	D	F	F	V	P	S	A	S	S	R	M	F	L	L	V	G	A	P	K	A	N	T	T	Q	P	G	I	V	E	G	G	Q	V	L	K	C	D	W	S	S	T	R	R	C	Q	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B			S	S								T	T	S		T	T	S	S							T	T	S	S									S	S				S	S	T	T		S	S									T	T	T	T					B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	F	D	A	T	G	N	R	D	Y	A	K	D	D	P	L	E	F	K	S	H	Q	W	F	G	A	S	V	R	S	K	Q	D	K	I	L	A	C	A	P	L	Y	H	W	R	T	E	M	K	Q	E	R	E	P	V	G	T	C	F	L	Q	D	G	T	K	T	V	E	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T			S				T	T			T	T	S						S	S							T	T						S	S	S	S													T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	C	R	S	Q	D	I	D	A	D	G	Q	G	F	C	Q	G	G	F	S	I	D	F	T	K	A	D	R	V	L	L	G	G	P	G	S	F	Y	W	Q	G	Q	L	I	S	D	Q	V	A	E	I	V	S	K	Y	D	P	N	V	Y	S	I	K	Y	N	N	Q	L	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			S			S	T	T	T	T	T	T			T	T	S						T	T	S							T	T					T	B											S	T	T			T	T		S					T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	T	A	Q	A	I	F	D	D	S	Y	L	G	Y	S	V	A	V	G	D	F	N	G	D	G	I	D	D	F	V	S	G	V	P	R	A	A	R	T	L	G	M	V	Y	I	Y	D	G	K	N	M	S	S	L	Y	N	F	T	G	E	Q	M	A	A	Y	F	G	F	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G		S			B	T	S								S	S	S	S	S								T	T					T								T	T	T										S	S	T	T	S		T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	A	T	D	I	N	G	D	D	Y	A	D	V	F	I	G	A	P	L	F	M	D	R	G	S	D	G	K	L	Q	E	V	G	Q	V	S	V	S	L	Q	R	A	S	G	D	F	Q	T	T	K	L	N	G	F	E	V	F	A	R	F	G	S	A	I	A	P	L	G	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	S	S									T	T						T	T	S															T	T	S								B		S	S	S	S	S		S	B	T			B			S		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	Q	D	G	F	N	D	I	A	I	A	A	P	Y	G	G	E	D	K	K	G	I	V	Y	I	F	N	G	R	S	T	G	L	N	A	V	P	S	Q	I	L	E	G	Q	W	A	A	R	S	M	P	P	S	F	G	Y	S	M	K	G	A	T	D	I	D	K	N	G	Y	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S	S				B				T	T		S	G	G	G											T	T					S		S										S	S	S				T	T	S						S			S	S	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Sequence	D	L	I	V	G	A	F	G	V	D	R	A	I	L	Y	R	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T							B

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PDB structure

FASTA sequence

Hidden Markov model

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