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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1js8a1

Fold library idFoldSuperfamilyFamily
d1js8a1Di-copper centre-containing domainDi-copper centre-containing domainHemocyanin middle domain


Added to library: Tue Mar 16 12:42:56 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AIIRKNVNSLTPSDIKELRDAMAKVQADTSDNGYQKIASYHGIPLSCHYENGTAYACCQHGMVTFPNWHR
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Known secondary structure (DSSP)

BGGG



STTSTTTSSS


TTS





SSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLTKQMEDALVAKGSHVGIPYWDWTTTFANLPVLVTEEKDNSFHHAHIDVANTDTTRSPRAQLFSFFYRQ
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Known secondary structure (DSSP) TT
SS


B

TTS

SS



TT
TTS

TTTT





GGG

 .........150.........160.........170.........180.........190.........200.........210
Sequence IALALEQTDFCDFEIQFEIGHNAIHSWVGGSSPYGMSTLHYTSYDPLFYLHHSNTDRIWSVWQALQKYRG
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Known secondary structure (DSSP)

STT
TTSTT
TTTGGGSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LPYNTANCEINKLVKPLKPFNLDTNPNAVTKAHSTGATSFDYHKLGYDYDNLNFHGMTIPELEEHLKEIQ
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Known secondary structure (DSSP) S
SS

SSSTTGGGSB
TTTTSTT


T
BGGGSS
GGGGTS


BTTB
T
 .
Sequence H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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