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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1jl5a_

Fold library idFoldSuperfamilyFamily
d1jl5a_Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)L domain-likeLeucine rich effector protein YopM


Added to library: Tue Mar 16 13:36:50 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSL
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 .........80.........90.........100.........110.........120.........130.........140
Sequence TELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPP
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 .........150.........160.........170.........180.........190.........200.........210
Sequence SLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIY
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 .........220.........230.........240.........250.........260.........270.........280
Sequence ADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLC
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 .........290.........300.........310.........320.........330.........340.........350
Sequence DLPPSLEELNVSNNKLIELPALPPRLERLIASFNHLAEVPELPQNLKQLHVEYNPLREFPDIPESVEDLR
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 ...
Sequence MNS
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Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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