Fold library entry viewer: d1jcna1

Added to library: Tue Mar 16 12:33:39 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	G	Y	V	P	E	D	G	L	T	A	Q	Q	L	F	A	S	A	D	D	L	T	Y	N	D	F	L	I	L	P	G	F	I	D	F	I	A	D	E	V	D	L	T	S	A	L	T	R	K	I	T	L	K	T	P	L	I	S	S	P	M	D	T	V	T	E	A	D	M	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S				B						T	T	S	S	S				G	G	G										S		G	G	G		B					S	S	S	S				S	S								T	T	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	A	M	A	L	M	G	G	I	G	F	I	H	H	N	C	T	P	E	F	Q	A	N	E	V	R	K	V	K	N	F	E	D	Y	P	L	A	S	K	D	S	Q	K	Q	L	L	C	G	A	A	V	G	T	R	E	D	D	K	Y	R	L	D	L	L	T	Q	A	G	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T								S	S														T					T	T			B		T	T	S		B								S	S	T	T											T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	I	V	L	D	S	S	Q	G	N	S	V	Y	Q	I	A	M	V	H	Y	I	K	Q	K	Y	P	H	L	Q	V	I	G	G	N	V	V	T	A	A	Q	A	K	N	L	I	D	A	G	V	D	G	L	R	V	G	M	G	C	G	S	I	C	I	T	Q	E	V	M	A	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S				S															T	T										S											T		S						S	S		S			B	T	T	B				S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	R	P	Q	G	T	A	V	Y	K	V	A	E	Y	A	R	R	F	G	V	P	I	I	A	D	G	G	I	Q	T	V	G	H	V	V	K	A	L	A	L	G	A	S	T	V	M	M	G	S	L	L	A	A	T	T	E	A	P	G	E	K	G	S	I	Q	K	F	V	P	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																G	G	G	T							S				S										T	T		S					S	T	T	T	T	T	S	T	T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Sequence	L	I	A	G	I	Q	H	G	C	Q	D	I	G	A	R	S	L	S	V	L	R	S	M	M	Y	S	G	E	L	K	F	E	K	R	T	M	S	A	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T		S	B										T	T		S							S	S

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PDB structure

FASTA sequence

Hidden Markov model

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