Fold library entry viewer: d1jb0b_

Added to library: Tue Mar 16 13:25:42 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	T	K	F	P	K	F	S	Q	D	L	A	Q	D	P	T	T	R	R	I	W	Y	A	I	A	M	A	H	D	F	E	S	H	D	G	M	T	E	E	N	L	Y	Q	K	I	F	A	S	H	F	G	H	L	A	I	I	F	L	W	V	S	G	S	L	F	H	V	A	W	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S	T	T						T			B	T										T	T		G	G	G	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	N	F	E	Q	W	V	Q	D	P	V	N	T	R	P	I	A	H	A	I	W	D	P	Q	F	G	K	A	A	V	D	A	F	T	Q	A	G	A	S	N	P	V	D	I	A	Y	S	G	V	Y	H	W	W	Y	T	I	G	M	R	T	N	G	D	L	Y	Q	G	A	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									T	T	T											T	T										S		T	T		S	S							S									T	T			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	L	I	L	A	S	L	A	L	F	A	G	W	L	H	L	Q	P	K	F	R	P	S	L	S	W	F	K	N	A	E	S	R	L	N	H	H	L	A	G	L	F	G	V	S	S	L	A	W	A	G	H	L	I	H	V	A	I	P	E	S	R	G	Q	H	V	G	W	D	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	S	G	G	G								T												T	T	T														T						T	T					T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	L	S	T	M	P	H	P	A	G	L	A	P	F	F	T	G	N	W	G	V	Y	A	Q	N	P	D	T	A	S	H	V	F	G	T	A	Q	G	A	G	T	A	I	L	T	F	L	G	G	F	H	P	Q	T	E	S	L	W	L	T	D	M	A	H	H	H	L	A	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	S		S	S	T	T		S					T	T		G	G	G	G	G	S	S				T	T			T	T	S	S	T	T					S	S					S			T	T	T		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	L	F	I	V	A	G	H	M	Y	R	T	Q	F	G	I	G	H	S	I	K	E	M	M	D	A	K	D	F	F	G	T	K	V	E	G	P	F	N	M	P	H	Q	G	I	Y	E	T	Y	N	N	S	L	H	F	Q	L	G	W	H	L	A	C	L	G	V	I	T	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S	B			T	T	S		S	B											B	T	T	B			S	S	G	G	G				T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	A	Q	H	M	Y	S	L	P	P	Y	A	F	I	A	Q	D	H	T	T	M	A	A	L	Y	T	H	H	Q	Y	I	A	G	F	L	M	V	G	A	F	A	H	G	A	I	F	L	V	R	D	Y	D	P	A	Q	N	K	G	N	V	L	D	R	V	L	Q	H	K	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S			S	T	T	G	G	G																																		T			S	G	G	G	T	T	S								T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	I	S	H	L	S	W	V	S	L	F	L	G	F	H	T	L	G	L	Y	V	H	N	D	V	V	V	A	F	G	T	P	E	K	Q	I	L	I	E	P	V	F	A	Q	F	I	Q	A	A	H	G	K	L	L	Y	G	F	D	T	L	L	S	N	P	D	S	I	A	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													T	T		G	G	G	S															T	T		G	G	G					T	T	S	S	T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	W	P	N	Y	G	N	V	W	L	P	G	W	L	D	A	I	N	S	G	T	N	S	L	F	L	T	I	G	P	G	D	F	L	V	H	H	A	I	A	L	G	L	H	T	T	T	L	I	L	V	K	G	A	L	D	A	R	G	S	K	L	M	P	D	K	K	D	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T					S										S	S	S	S		T	T																															T	S	S			S	S		T	T	G	G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Y	A	F	P	C	D	G	P	G	R	G	G	T	C	D	I	S	A	W	D	A	F	Y	L	A	M	F	W	M	L	N	T	I	G	W	V	T	F	Y	W	H	W	K	H	L	G	V	W	E	G	N	V	A	Q	F	N	E	S	S	T	Y	L	M	G	W	L	R	D	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S		S		S	G	G	G			T	T		S																																	T									T	T	S								T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	W	L	N	S	S	Q	L	I	N	G	Y	N	P	F	G	T	N	N	L	S	V	W	A	W	M	F	L	F	G	H	L	V	W	A	T	G	F	M	F	L	I	S	W	R	G	Y	W	Q	E	L	I	E	T	L	V	W	A	H	E	R	T	P	L	A	N	L	V	R	W	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	G	G	G	S			T	T				T	T																							S																		T	S	T	T	G	G	G				S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
Sequence	D	K	P	V	A	L	S	I	V	Q	A	R	L	V	G	L	A	H	F	S	V	G	Y	I	L	T	Y	A	A	F	L	I	A	S	T	A	A	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B																																			T

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PDB structure

FASTA sequence

Hidden Markov model

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