Fold library entry viewer: d1jb0a_

Added to library: Tue Mar 16 12:34:11 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	V	V	V	D	N	D	P	V	P	T	S	F	E	K	W	A	K	P	G	H	F	D	R	T	L	A	R	G	P	Q	T	T	T	W	I	W	N	L	H	A	L	A	H	D	F	D	T	H	T	S	D	L	E	D	I	S	R	K	I	F	S	A	H	F	G	H	L	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		S				T	T	T	T	T	S	T	T	T	T		G	G	G	T	T			S	B	T									T	T	T		G	G	G	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	F	I	W	L	S	G	M	Y	F	H	G	A	K	F	S	N	Y	E	A	W	L	A	D	P	T	G	I	K	P	S	A	Q	V	V	W	P	I	V	G	Q	G	I	L	N	G	D	V	G	G	G	F	H	G	I	Q	I	T	S	G	L	F	Q	L	W	R	A	S	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S										T	T	T	S											T	T	G	G	G	G	S					T	T								S										T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	N	E	F	Q	L	Y	C	T	A	I	G	G	L	V	M	A	G	L	M	L	F	A	G	W	F	H	Y	H	K	R	A	P	K	L	E	W	F	Q	N	V	E	S	M	L	N	H	H	L	A	G	L	L	G	L	G	S	L	A	W	A	G	H	Q	I	H	V	S	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S																												T									T												T																T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	N	K	L	L	D	A	G	V	A	A	K	D	I	P	L	P	H	E	F	I	L	N	P	S	L	M	A	E	L	Y	P	K	V	D	W	G	F	F	S	P	F	F	T	F	N	W	A	A	Y	S	D	F	L	T	F	N	G	G	L	N	P	V	T	G	G	L	W	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T			S	T	T	S			T	T												S	S	T	T	S				S				T	T	T	T		G	G	G	G	T	T	T	S					S			T	T	T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	T	A	H	H	H	L	A	I	A	V	L	F	I	I	A	G	H	M	Y	R	T	N	W	G	I	G	H	S	L	K	E	I	L	E	A	H	K	G	P	F	T	G	A	G	H	K	G	L	Y	E	V	L	T	T	S	W	H	A	Q	L	A	I	N	L	A	M	M	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T		B			S	S	S		S	B												S	S	S	T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	S	I	I	V	A	Q	H	M	Y	A	M	P	P	Y	P	Y	L	A	T	D	Y	P	T	Q	L	S	L	F	T	H	H	M	W	I	G	G	F	L	V	V	G	G	A	A	H	G	A	I	F	M	V	R	D	Y	D	P	A	M	N	Q	N	N	V	L	D	R	V	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S			S	T	T		T	T																																		T			G	G	G	G	S	S	S							T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	H	R	D	A	I	I	S	H	L	N	W	V	C	I	F	L	G	F	H	S	F	G	L	Y	V	H	N	D	T	M	R	A	F	G	R	P	Q	D	M	F	S	D	T	G	I	Q	L	Q	P	V	F	A	Q	W	V	Q	N	L	H	T	L	A	P	G	G	T	A	P	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																																	T		G	G	G	S	B	S	T	T	S	B																	T	B	T	T	T	B	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	A	T	A	S	V	A	F	G	G	D	V	V	A	V	G	G	K	V	A	M	M	P	I	V	L	G	T	A	D	F	M	V	H	H	I	H	A	F	T	I	H	V	T	V	L	I	L	L	K	G	V	L	F	A	R	S	S	R	L	I	P	D	K	A	N	L	G	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		S		T	T	S	S	S						T	T																																					T	S	S			S	S		T	T						S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	P	C	D	G	P	G	R	G	G	T	C	Q	V	S	G	W	D	H	V	F	L	G	L	F	W	M	Y	N	C	I	S	V	V	I	F	H	F	S	W	K	M	Q	S	D	V	W	G	T	V	A	P	D	G	T	V	S	H	I	T	G	G	N	F	A	Q	S	A	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		S		T	T			T	T		S																															T						T	T						T	T	T	T						T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	I	N	G	W	L	R	D	F	L	W	A	Q	A	S	Q	V	I	G	S	Y	G	S	A	L	S	A	Y	G	L	L	F	L	G	A	H	F	I	W	A	F	S	L	M	F	L	F	S	G	R	G	Y	W	Q	E	L	I	E	S	I	V	W	A	H	N	K	L	K	V	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T					T							T	T	S	T	T																							S																			T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740
Sequence	A	I	Q	P	R	A	L	S	I	I	Q	G	R	A	V	G	V	A	H	Y	L	L	G	G	I	A	T	T	W	A	F	F	L	A	R	I	I	S	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	B

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PDB structure

FASTA sequence

Hidden Markov model

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