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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1itza2

Fold library idFoldSuperfamilyFamily
d1itza2Thiamin diphosphate-binding fold (THDP-binding)Thiamin diphosphate-binding fold (THDP-binding)TK-like Pyr module


Added to library: Tue Mar 16 13:59:06 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LPTGWVDALPKYTPESPGDATRNLSQQCLNALANVVPGLIGGSADLASSNMTLLKMFGDFQKDTAEERNV
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Known secondary structure (DSSP)

TTGGGGS



TTS

B

TTSS
T


TT

B

TT
TT

B
 .........80.........90.........100.........110.........120.........130.........140
Sequence RFGVREHGMGAICNGIALHSPGFVPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQ
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Known secondary structure (DSSP)


S
TT
TT
GGGT




SGGG
TT
TTT
 .........150.........160.........170.........180.........190..
Sequence PIEHLVSFRAMPNILMLRPADGNETAGAYKVAVLNRKRPSILALSRQKLPHL
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SS confidence



















































Known secondary structure (DSSP)
SSSSSS



S
TTS

SS
B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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