PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1ii2a2

Fold library id	Fold	Superfamily	Family
d1ii2a2	PEP carboxykinase N-terminal domain	PEP carboxykinase N-terminal domain	PEP carboxykinase N-terminal domain

Links to external resources
Added to library: Tue Mar 16 13:26:27 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P P T I H R N L L S P E L V Q W A L K I E K D S R L T A R G A L A V M S Y A K T G R S P L D K R I V D T D D V R E N V D W G K V N M K L S E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
T T S
T T
S S
G G G
T T S
B T T T B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E S F A R V R K I A K E F L D T R E H L F V V D C F A G H D E R Y R L K V R V F T T R P Y H A L F M R D M L I V P T P E E L A T F G E P D Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
S S T T T
S S S B
T
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . .

Sequence V I Y N A G E C K A D P S I P G L T S T T C V A L N F K T R E Q V I L G T E Y A G E M K K G I L T V M F E L M P Q M N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T S T T
S S
T T T T S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	P	T	I	H	R	N	L	L	S	P	E	L	V	Q	W	A	L	K	I	E	K	D	S	R	L	T	A	R	G	A	L	A	V	M	S	Y	A	K	T	G	R	S	P	L	D	K	R	I	V	D	T	D	D	V	R	E	N	V	D	W	G	K	V	N	M	K	L	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S															T	T					T	T	S							T	T		S	S			G	G	G											T	T	S		B	T	T	T	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	S	F	A	R	V	R	K	I	A	K	E	F	L	D	T	R	E	H	L	F	V	V	D	C	F	A	G	H	D	E	R	Y	R	L	K	V	R	V	F	T	T	R	P	Y	H	A	L	F	M	R	D	M	L	I	V	P	T	P	E	E	L	A	T	F	G	E	P	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	S	S											S	S	T	T	T									S	S											S	B									T			S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Sequence	V	I	Y	N	A	G	E	C	K	A	D	P	S	I	P	G	L	T	S	T	T	C	V	A	L	N	F	K	T	R	E	Q	V	I	L	G	T	E	Y	A	G	E	M	K	K	G	I	L	T	V	M	F	E	L	M	P	Q	M	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S				T	T	S	T	T			S	S							T	T	T	T						S				T																		T