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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1hxs1_

Fold library idFoldSuperfamilyFamily
d1hxs1_Nucleoplasmin-like/VP (viral coat and capsid proteins)Positive stranded ssRNA virusesPicornaviridae-like VP (VP1, VP2, VP3 and VP4)


Added to library: Tue Mar 16 12:34:50 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSSSTAATSRDALPNTEASGPTHSKEIPALTAVETGATNPLVPSDTVQTRHVVQHRSRSESSIESFFARG
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Known secondary structure (DSSP)







TTSB


B

B



SS

TT


GGGS





GGGTS
B

B



B
GGGS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ACVTIMTVDNPASTTNKDKLFAVWKITYKDTVQLRRKLEFFTYSRFDMELTFVVTANFTETNNGHALNQV
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Known secondary structure (DSSP)

TT
SS





S
SSSTT
SS







 .........150.........160.........170.........180.........190.........200.........210
Sequence YQIMYVPPGAPVPEKWDDYTWQTSSNPSIFYTYGTAPARISVPYVGISNAYSHFYDGFSKVPLKDQSAAL
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Known secondary structure (DSSP)
TTS


SSTTSGGGG
SSS
TTSS




SSSSS


S
S



TTS
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GDSLYGAASLNDFGILAVRVVNDHNPTKVTSKIRVYLKPKHIRVWCPRPPRAVAYYGPGVDYKDGTLTPL
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Known secondary structure (DSSP) T


TT

GGG



S


SS





S


SSSS


TT




 ........
Sequence STKDLTTY
Predicted secondary structure







SS confidence







Known secondary structure (DSSP)



TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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