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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1h3ga3

Fold library idFoldSuperfamilyFamily
d1h3ga3TIM beta/alpha-barrel(Trans)glycosidasesAmylase, catalytic domain


Added to library: Tue Mar 16 13:43:37 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSAQRQGFGPGDAIYQIXPDRFANGDPSNDNVAGXREQADRRHGGGRHGGDIRGTIDHLDYIAGLGFTQL
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Known secondary structure (DSSP)

TT




TT




S
GGGSS
TT
SS


TTSTTS




TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence WPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGXGLIQDVVLSHIGKHHWWXKDLP
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Known secondary structure (DSSP)





SS
GGG

S
S
TTT

TT


SB

TTSGGGGS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence TPDWINYGGKFVPTQHHRVAVQDPYAAQADSENFTKGWFVEGXPDLNQTNPLVANYLIQNNIWWIEYAGL
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Known secondary structure (DSSP) STTSBS

SS

B



GGGGS
TT

SBSSTTS
BB
TTST
 .........220.........230.........240.........250.........260.........270.........280
Sequence SGLRIDTYGYSDGAFLTEYTRRLXAEYPRLNXVGEEWSTRVPVVARWQRGKANFDGYTSHLPSLXDFPLV
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Known secondary structure (DSSP) STTGGGS

TT




S
TTSTT


TT






B
 .........290.........300.........310.........320.........330.........340.........350
Sequence DAXRNALSKTGEENGLNEVYETLSLDYLYPEPQNLVLFGGNHDXARXFSAAGEDFDRWRXNLVFLXTXPR
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Known secondary structure (DSSP)
TT
SSTTGGGGSSSGGGSS

TTS

TTS
SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence IPQFYSGDEILXTSTVKGRDDASYRRDFPGGWAGDKANAFSGAGLTSQQRAAQDLVRKLANWRKNQPVIH
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Known secondary structure (DSSP) TTGGGT




SSS
GGGGS


TTSSTT
SS
TTT
TT

TT
 ..
Sequence NG
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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