PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1h1ya_

Fold library id	Fold	Superfamily	Family
d1h1ya_	TIM beta/alpha-barrel	Ribulose-phoshate binding barrel	D-ribulose-5-phosphate 3-epimerase

Links to external resources
Added to library: Tue Mar 16 13:15:41 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A A K I A P S M L S S D F A N L A A E A D R M V R L G A D W L H M D I M D G H F V P N L T I G A P V I Q S L R K H T K A Y L D C H L M V T N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B G G G S
G G G T T
S B S S S S S
B
T T
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P S D Y V E P L A K A G A S G F T F H I E V S R D N W Q E L I Q S I K A K G M R P G V S L R P G T P V E E V F P L V E A E N P V E L V L V M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G T
S G G G
T T T T T
T T S
G G G G S S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T V E P G F G G Q K F M P E M M E K V R A L R K K Y P S L D I E V D G G L G P S T I D V A A S A G A N C I V A G S S I F G A A E P G E V I S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T
S S
G G G
T T S S S
S T T T T
S T S S

. . . . . . . . .

Sequence A L R K S V E G S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	A	K	I	A	P	S	M	L	S	S	D	F	A	N	L	A	A	E	A	D	R	M	V	R	L	G	A	D	W	L	H	M	D	I	M	D	G	H	F	V	P	N	L	T	I	G	A	P	V	I	Q	S	L	R	K	H	T	K	A	Y	L	D	C	H	L	M	V	T	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B	G	G	G	S		G	G	G											T	T		S								B	S	S	S	S	S		B												T	T			S								S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	S	D	Y	V	E	P	L	A	K	A	G	A	S	G	F	T	F	H	I	E	V	S	R	D	N	W	Q	E	L	I	Q	S	I	K	A	K	G	M	R	P	G	V	S	L	R	P	G	T	P	V	E	E	V	F	P	L	V	E	A	E	N	P	V	E	L	V	L	V	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G								T		S						G	G	G		T	T	T											T	T									T	T	S		G	G	G	G						S	S	S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	V	E	P	G	F	G	G	Q	K	F	M	P	E	M	M	E	K	V	R	A	L	R	K	K	Y	P	S	L	D	I	E	V	D	G	G	L	G	P	S	T	I	D	V	A	A	S	A	G	A	N	C	I	V	A	G	S	S	I	F	G	A	A	E	P	G	E	V	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		T	T		S	S					G	G	G												T	T	S						S	S		S	T	T	T								T							S					T	S	S
	.	.	.	.	.	.	.	.	.
Sequence	A	L	R	K	S	V	E	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)