PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1gota2

Fold library id	Fold	Superfamily	Family
d1gota2	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	G proteins

Links to external resources
Added to library: Tue Mar 16 13:55:13 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S A E E K H S R E L E K K L K E D A E K D A R T V K L L L L G A G E S G K S T I V K Q X K I I H Q D G Y S L E E T Q F S F K D L N F R X F D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S T T S S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V G G Q R S E R K K W I H C F E G V T A I I F C V A L S D Y D L V L A E D E E X N R X H E S X K L F D S I C N N K W F T D T S I I L F L N K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
G G G T G G G G T T
S G G G G G
B
S S
T T S B T
G G G T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K D L F E E K I K K S P L T I C Y P E Y A G S N T Y E E A G N Y I K V Q F L E L N X R R D V K E I Y S H X T C A T D T Q N V K F V F D A V T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
G G G T
T T
S
S T T
S S
T T

. . . . . . .

Sequence D I I I K E N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	A	E	E	K	H	S	R	E	L	E	K	K	L	K	E	D	A	E	K	D	A	R	T	V	K	L	L	L	L	G	A	G	E	S	G	K	S	T	I	V	K	Q	X	K	I	I	H	Q	D	G	Y	S	L	E	E	T	Q	F	S	F	K	D	L	N	F	R	X	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T									S	T	T	S	S													S													T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	G	G	Q	R	S	E	R	K	K	W	I	H	C	F	E	G	V	T	A	I	I	F	C	V	A	L	S	D	Y	D	L	V	L	A	E	D	E	E	X	N	R	X	H	E	S	X	K	L	F	D	S	I	C	N	N	K	W	F	T	D	T	S	I	I	L	F	L	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			S		G	G	G	T	G	G	G	G	T	T		S								G	G	G	G	G		B		S	S		T	T	S	B														T		G	G	G	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	D	L	F	E	E	K	I	K	K	S	P	L	T	I	C	Y	P	E	Y	A	G	S	N	T	Y	E	E	A	G	N	Y	I	K	V	Q	F	L	E	L	N	X	R	R	D	V	K	E	I	Y	S	H	X	T	C	A	T	D	T	Q	N	V	K	F	V	F	D	A	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	S		G	G	G	T		T	T			S			S														T	T				S	S											T	T
	.	.	.	.	.	.	.
Sequence	D	I	I	I	K	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T