Fold library entry viewer: d1gnla_

Added to library: Tue Mar 16 13:55:12 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	N	A	M	F	C	Y	Q	C	Q	E	T	V	G	N	K	G	C	T	Q	V	G	V	C	G	K	K	P	E	T	A	A	L	Q	D	A	L	I	Y	V	T	K	G	L	G	Q	I	A	T	R	L	R	A	E	G	K	A	V	D	H	R	I	D	R	L	V	T	G	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			B			S	T	T		G	G	G	T		B		S	S		T	T																														T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	A	T	I	T	N	A	N	F	D	D	D	I	L	A	E	R	V	R	M	T	C	A	A	K	K	E	L	A	A	S	L	T	D	K	S	G	L	S	D	A	A	L	W	E	A	S	E	K	S	A	M	L	A	K	A	G	T	V	G	V	M	A	T	T	D	D	D	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S	T	T	T	B																							T		S			T	T										S	S									T	T	T	S	G	G	G			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	L	R	W	L	I	T	F	G	L	K	G	M	A	A	Y	A	K	H	A	D	V	L	G	K	H	E	N	S	L	D	A	F	M	Q	E	A	L	A	K	T	L	D	D	S	L	S	V	A	D	L	V	A	L	T	L	E	T	G	K	F	G	V	S	A	M	A	L	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T																	T	T		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	A	N	T	G	T	Y	G	H	P	E	I	T	K	V	N	I	G	V	G	S	N	P	G	I	L	I	S	G	H	D	L	R	D	L	E	M	L	L	K	Q	T	E	G	T	G	V	D	V	Y	T	H	S	E	M	L	P	A	H	Y	Y	P	A	F	K	K	Y	A	H	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S			S	S							S	S													T	T	T	T							G	G	G	G	G	G	G	G	S	G	G	G	G	G		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	G	N	Y	G	N	A	W	W	K	Q	K	E	E	F	E	S	F	N	G	P	V	L	L	T	T	N	C	L	V	P	P	K	D	S	Y	K	D	R	V	Y	T	T	G	I	V	G	F	T	G	C	K	H	I	P	G	E	I	G	E	H	K	D	F	S	A	I	I	A	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	G	G	G										S					S	S	S											T	T					T	T		B		T	T	S						S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	K	T	C	P	A	P	T	E	I	E	S	G	E	I	I	G	G	F	A	H	N	Q	V	L	A	L	A	D	K	V	I	D	A	V	K	S	G	A	I	K	K	F	V	V	M	A	G	C	D	G	R	A	K	S	R	S	Y	Y	T	D	F	A	E	G	L	P	K	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S						S			S														T										T	T	S									B				S		G	G	G										S		T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	I	L	T	A	G	C	A	K	Y	R	Y	N	K	L	N	L	G	D	I	G	G	I	P	R	V	L	D	A	G	Q	C	N	D	S	Y	S	L	A	V	I	A	L	K	L	K	E	V	F	G	L	E	D	V	N	D	L	P	I	V	Y	N	I	A	W	Y	E	Q	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	G	G	G	G	G	T	T	T	S						T	T			S						S	G	G	G															T	T		S		G	G	G	S	S									S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Sequence	V	I	V	L	L	A	L	L	S	L	G	V	K	N	I	H	L	G	P	T	L	P	A	F	L	S	P	N	V	A	K	V	L	V	E	Q	F	N	I	G	G	I	T	S	P	Q	D	D	L	K	A	F	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T								S	S			T	T																B												T

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PDB structure

FASTA sequence

Hidden Markov model

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