Fold library entry viewer: d1gjwa2

Added to library: Tue Mar 16 12:06:17 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	L	L	R	E	I	N	R	Y	C	K	E	K	A	T	G	K	R	I	Y	A	V	P	K	L	W	I	P	G	F	F	K	K	F	D	E	K	S	G	R	C	F	V	D	P	Y	E	L	G	A	E	I	T	D	W	I	L	N	Q	S	R	E	W	D	Y	S	Q	P	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								G	G	G	S		T	T								T	T																			T	T			S	S		T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	L	K	G	E	K	T	P	D	W	I	K	R	S	V	V	Y	G	S	L	P	R	T	T	A	A	Y	N	H	K	G	S	G	Y	Y	E	E	N	D	V	L	G	F	R	E	A	G	T	F	F	K	M	M	L	L	L	P	F	V	K	S	L	G	A	D	A	I	Y	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T			S	G	G	G	G	G	G												T				T	T	S	S	S				S	B		T	T	S		B		S									T								T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	V	S	R	M	S	D	L	F	K	K	G	D	A	P	S	P	Y	S	V	K	N	P	M	E	L	D	E	R	Y	H	D	P	L	L	E	P	F	K	V	D	E	E	F	K	A	F	V	E	A	C	H	I	L	G	I	R	V	I	L	D	F	I	P	R	T	A	A	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S		S	S	S	S			T	T	S									G	G	G	S		G	G	G	T	T	S																T	T									T	T				T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	D	L	I	R	E	H	P	D	W	F	Y	W	I	K	V	E	E	L	A	D	Y	T	P	P	R	A	E	E	L	P	F	K	V	P	D	E	D	E	L	E	I	I	Y	N	K	E	N	V	K	R	H	L	K	K	F	T	L	P	P	N	L	I	D	P	Q	K	W	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	T	T		G	G	G	S					G	G	G	S	T	T							T	T	S		S	B												T	S								T	T	B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	K	R	E	E	G	N	I	L	E	L	I	V	K	E	F	G	I	I	T	P	P	G	F	S	D	L	I	N	D	P	Q	P	T	W	D	D	V	T	F	L	R	L	Y	L	D	H	P	E	A	S	K	R	F	L	D	P	N	Q	P	P	Y	V	L	Y	D	V	I	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T		S	S											S						B			S	S	B	T			S			B	T	T							B	S	S			G	G	G	G	G	G	S		T	T												T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	K	F	P	G	K	E	P	N	R	E	L	W	E	Y	L	A	G	V	I	P	H	Y	Q	K	K	Y	G	I	D	G	A	R	L	D	M	G	H	A	L	P	K	E	L	L	D	L	I	I	K	N	V	K	E	Y	D	P	A	F	V	M	I	A	E	E	L	D	M	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S			S	S	B									T	T																	S	S	G	G	G	S																	T	T										G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	K	A	S	K	E	A	G	Y	D	V	I	L	G	S	S	W	Y	F	A	G	R	V	E	E	I	G	K	L	P	D	I	A	E	E	L	V	L	P	F	L	A	S	V	E	T	P	D	T	P	R	I	A	T	R	K	Y	A	S	K	M	K	K	L	A	P	F	V	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T		S											T		T	T	T	G	G	G							T		S	S						S			T	T	S			G	G	G	S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	F	L	P	N	S	I	P	Y	V	N	T	G	Q	E	I	G	E	K	Q	P	M	N	L	G	L	D	T	D	P	N	L	R	K	V	L	S	P	T	D	E	F	F	G	K	L	A	F	F	D	H	Y	V	L	H	W	D	S	P	D	R	G	V	L	N	F	I	K	K	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	T	T							T	T	G	G	G	T			S		S				S	S			G	G	G	G	G		S		T	T	S	T	T	T	T			T	T	T	S						T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.
Sequence	K	V	R	H	E	F	L	D	F	V	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T

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PDB structure

FASTA sequence

Hidden Markov model

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