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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1g5ga1

Fold library idFoldSuperfamilyFamily
d1g5ga1Head and neck region of the ectodomain of NDV fusion glycoproteinHead and neck region of the ectodomain of NDV fusion glycoproteinHead and neck region of the ectodomain of NDV fusion glycoprotein


Added to library: Tue Mar 16 11:58:15 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DGRPLAAAGIVVTGDKAVNIYTSSQTGSIIIKLLQITSPALTQLTIQALYNLAGGNMDYLLTKLGVGNNQ
Predicted secondary structure























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Known secondary structure (DSSP)

SGGGTTT

S





TT
SS


TTT
S

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LSSLISSGLITGNPILYDSQTQLLGIQVTLPSVGNLNNMRATYLETLSVSTTKGFASALVPKVVTQVGSV
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Known secondary structure (DSSP) T
S
TTTTB







TT
TT





SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence IEELDTSYCIETDLDLYCTRIVTFPMSPGIYSCLSGNTSACMYSKTEGALTTPYMTLKGSVIANCKMTTC
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Known secondary structure (DSSP)

GGG
SSS





TT
STT







TT

S
SSS
TTTS

 .........220.........230.........240.........250.........260.....
Sequence RCADPPGIISQNYGEAVSLIDRQSCNILSLDGITLRLSGEFDATYQKNISIQDSQ
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Known secondary structure (DSSP) B
SSS
SB



TTT
SB


TTT
SB


SS


B



















Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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