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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1g5aa2

Fold library idFoldSuperfamilyFamily
d1g5aa2TIM beta/alpha-barrel(Trans)glycosidasesAmylase, catalytic domain


Added to library: Tue Mar 16 12:05:54 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SPNSQYLKTRILDIYTPEQRAGIEKSEDWRQFSRRMDTHFPKLMNELDSVYGNNEALLPMLEMLLAQAWQ
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Known secondary structure (DSSP)


GGGS
STT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SYSQRNSSLKDIDIARENNPDWILSNKQVGGVCYVDLFAGDLKGLKDKIPYFQELGLTYLHLMPLFKCPE
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Known secondary structure (DSSP) S
T
GGGGG
TT


SSTTT
S


B


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence GKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDFIFNHTSNEHEWAQRCAAGDPLFDNFYY
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Known secondary structure (DSSP) S
STTTTS
S
SSSB
TTT

TT


STTSTT
GGGTTSB
 .........220.........230.........240.........250.........260.........270.........280
Sequence IFPDRRMPDQYDRTLREIFPDQHPGGFSQLEDGRWVWTTFNSFQWDLNYSNPWVFRAMAGEMLFLANLGV
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Known secondary structure (DSSP) SSSTTT


SSTTT
STT
TTS

SSSTTB
TTSTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence DILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAPAVFFKSEAIVHPDQVVQYIGQDECQIGYN
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Known secondary structure (DSSP) STTGGGS


TTS
SSS

TT



S
GGGBSTTSBS
 .........360.........370.........380.........390.........400.........410.........420
Sequence PLQMALLWNTLATREVNLLHQALTYRHNLPEHTAWVNYVRSHDDIGWTFADEDAAYLGISGYDHRQFLNR
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Known secondary structure (DSSP)


S



TT
S

SS
B




TT

 .........430.........440.........450.........460.........470.........480.........490
Sequence FFVNRFDGSFARGVPFQYNPSTGDCRVSGTAAALVGLAQDDPHAVDRIKLLYSIALSTGGLPLIYLGDEV
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Known secondary structure (DSSP) TT
STT







TTT




TGGGT
TTSSSTTGGG
 .........500.........510.........520.........530.........540.........550....
Sequence GTLNDDDWSQDSNKSDDSRWAHRPRYNEALYAQRNDPSTAAGQIYQDLRHMIAVRQSNPRFDGG
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Known secondary structure (DSSP) T



SSGGG
TTTTT
GGGGG




TTTT
TTS
GGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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