![]() |
| ||||||
Protein Homology/analogY Recognition Engine V 2.2 |
|
Fold library id | Fold | Superfamily | Family |
---|---|---|---|
d1fmd1_ | Nucleoplasmin-like/VP (viral coat and capsid proteins) | Positive stranded ssRNA viruses | Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |
Added to library: Tue Mar 16 12:56:25 2010 | |
  | |
Links to external resources | |
---|---|
![]() | ![]() |
  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | T | T | T | T | G | E | S | A | D | P | V | T | T | T | V | E | N | Y | G | G | E | T | Q | V | Q | R | R | H | H | T | D | V | A | F | V | L | D | R | F | V | K | V | T | V | S | D | N | Q | H | T | L | D | V | M | Q | A | H | K | D | N | I | V | G | A | L | L | R | A | A | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | G | G | G | G | G | G | T | G | G | G | G | ![]() | ![]() | ![]() | ![]() | T | S | S | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | G | G | G | S | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | Y | Y | F | S | D | L | E | I | A | V | T | H | T | G | K | L | T | W | V | P | N | G | A | P | V | S | A | L | N | N | T | T | N | P | T | A | Y | H | K | G | P | V | T | R | L | A | L | P | Y | T | A | P | H | R | V | L | A | T | A | Y | T | G | A | H | L | P | T | S | F | N |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | G | G | G | G | G | T | T | S | S | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | ![]() | ![]() | S | T | T | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
Sequence | F | G | A | V | K | A | E | T | I | T | E | L | L | V | R | M | K | R | A | E | L | Y | C | P | R | P | I | L | P | I | Q | P | T | G | D | R | H | K | Q | P | L | V | A | P | A | K | Q | |||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S |
Download: | PDB structure | FASTA sequence |
Phyre is now FREE for commercial users! All images and data generated by Phyre2 are free to use in any publication with acknowledgement Accessibility Statement
|