Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1ev11_

Fold library idFoldSuperfamilyFamily
d1ev11_Nucleoplasmin-like/VP (viral coat and capsid proteins)Positive stranded ssRNA virusesPicornaviridae-like VP (VP1, VP2, VP3 and VP4)


Added to library: Tue Mar 16 12:10:35 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GDVQNAVEGAMVRVADTVQTSATNSERVPNLTAVETGHTSQAVPGDTMQTRHVINNHVRSESTIENFLAR
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)

TT

S




B


B






SS

TT


GGGS





GGGTS



B



B

TTS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence SACVFYLEYKTGTKEDSNSFNNWVITTRRVAQLRRKLEMFTYLRFDMEITVVITSSQDQSTSQNQNAPVL
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
S

TT
GGG

GGGSSTT

STTTT





 .........150.........160.........170.........180.........190.........200.........210
Sequence THQIMYVPPGGPIPVSVDDYSWQTSTNPSIFWTEGNAPARMSIPFISIGNAYSNFYDGWSHFSQAGVYGF
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP)
TTS



STTSGGGG
SSS
TTS





SSSSS


STTTSG
 .........220.........230.........240.........250.........260.........270.........280
Sequence TTLNNMGQLFFRHVNKPNPAAITSVARIYFKPKHVRAWVPRPPRLCPYINSTNVNFEPKPVTEVRTNIIT
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) GGT




S


SS





S



SSS






SS


S
SS
 .
Sequence T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D