Fold library entry viewer: d1ea0a2

Added to library: Tue Mar 16 14:24:53 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	T	H	L	D	E	L	V	K	T	A	S	L	K	G	E	P	S	D	M	D	K	A	E	L	R	R	R	Q	Q	A	F	G	L	T	M	E	D	M	E	L	I	L	H	P	M	V	E	D	G	K	E	A	I	G	S	M	G	D	D	S	P	I	A	V	L	S	D	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B		T	T									T	T							T									T	T	T								T	T	T							S	S						S				S			G	G	G		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	G	L	H	H	F	F	R	Q	N	F	S	Q	V	T	N	P	P	I	D	S	L	R	E	R	R	V	M	S	L	K	T	R	L	G	N	L	G	N	I	L	D	E	D	E	T	Q	T	R	L	L	Q	L	E	S	P	V	L	T	T	A	E	F	R	A	M	R	D	Y	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	T								S	S	S					T	T	T	T	G	G	G								S			S		T	T			S	G	G	G	S		S				S		S	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	D	T	A	A	E	I	D	A	T	F	P	V	D	G	G	P	E	A	L	R	D	A	L	R	R	I	R	Q	E	T	E	D	A	V	R	G	G	A	T	H	V	I	L	T	D	E	A	M	G	P	A	R	A	A	I	P	A	I	L	A	T	G	A	V	H	T	H	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G										S	T	T		T	T																				T									T	T		B	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	S	N	L	R	T	F	T	S	L	N	V	R	T	A	E	G	L	D	T	H	Y	F	A	V	L	I	G	V	G	A	T	T	V	N	A	Y	L	A	Q	E	A	I	A	E	R	H	R	R	G	L	F	G	S	M	P	L	E	K	G	M	A	N	Y	K	K	A	I	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T		G	G	G								S	S			S									T	T	T		S																T	T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	L	L	K	I	M	S	K	M	G	I	S	V	I	S	S	Y	R	G	G	G	N	F	E	A	I	G	L	S	R	A	L	V	A	E	H	F	P	A	M	V	S	R	I	S	G	I	G	L	N	G	I	Q	K	K	V	L	E	Q	H	A	T	A	Y	N	E	E	V	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T								T	T	S						S	S	B									S	S	S				S	S			B																		S	S			S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	P	V	G	G	F	Y	R	F	R	K	S	G	D	R	H	G	W	E	G	G	V	I	H	T	L	Q	Q	A	V	T	N	D	S	Y	T	T	F	K	K	Y	S	E	Q	V	N	K	R	P	P	M	Q	L	R	D	L	L	E	L	R	S	T	K	A	P	V	P	V	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S			S	S	S	S			S	S															T														T	S				S	G	G	G	G						S	S					G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	E	S	I	T	A	I	R	K	R	F	I	T	P	G	M	S	M	G	A	L	S	P	E	A	H	G	T	L	N	V	A	M	N	R	I	G	A	K	S	D	S	G	E	G	G	E	D	P	A	R	F	R	P	D	K	N	G	D	N	W	N	S	A	I	K	Q	V	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S								T	T								B	T	T	B															T	T							T	T				G	G	G	S	S	B		T	T	S		B				S						S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	R	F	G	V	T	A	E	Y	L	N	Q	C	R	E	L	E	I	K	V	A	Q	G	A	K	P	G	E	G	G	Q	L	P	G	F	K	V	T	E	M	I	A	R	L	R	H	S	T	P	G	V	M	L	I	S	P	P	P	H	H	D	I	Y	S	I	E	D	L	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T							T	S		S									T	T	S	T	T	T						G	G	G										T			T	T							S	S		T	T		S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	I	Y	D	L	K	Q	I	N	P	D	A	K	V	T	V	K	L	V	S	R	S	G	I	G	T	I	A	A	G	V	A	K	A	N	A	D	I	I	L	I	S	G	N	S	G	G	T	G	A	S	P	Q	T	S	I	K	F	A	G	L	P	W	E	M	G	L	S	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T											T	T											T	T		S							T	T				S	S			T	T					S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	H	Q	V	L	T	L	N	R	L	R	H	R	V	R	L	R	T	D	G	G	L	K	T	G	R	D	I	V	I	A	A	M	L	G	A	E	E	F	G	I	G	T	A	S	L	I	A	M	G	C	I	M	V	R	Q	C	H	S	N	T	C	P	V	G	V	C	V	Q	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T		T	T	T	S						S	S			S										T	T		S													T							T	T	T	T			T	T	S	S	S				T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.
Sequence	K	L	R	Q	K	F	V	G	T	P	E	K	V	V	N	L	F	T	F	L	A	E	E	V	R	E	I	L	A	G	L	G	F	R	S	L	N	E	V	I	G	R	T	D	L	L	H	Q	V	D	L	D	L	N	P	R	L	A	Q	V	D	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	G	G	G	S																											T		S		S	G	G	G	T	T		G	G	G															S	S

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PDB structure

FASTA sequence

Hidden Markov model

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