PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1e6yb1

Fold library id	Fold	Superfamily	Family
d1e6yb1	Methyl-coenzyme M reductase alpha and beta chain C-terminal domain	Methyl-coenzyme M reductase alpha and beta chain C-terminal domain	Methyl-coenzyme M reductase alpha and beta chain C-terminal domain

Links to external resources
Added to library: Tue Mar 16 14:11:57 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G F S L R N I M A N H V A A I S N R N A M N A S A L S S I Y E Q S G I F E M G G A V G M F E R H Q L L G L A Y Q G L N A N N L L Y D I V K E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T T
T T
S S T
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N G K D G T I G T V I E S V V R R A I E A G I I S V D K T A P S G Y N F Y K A N D V P K W N A C A A V G T L A A T L V N C G A G R A A Q N V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T S
T T S
S S T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S S T L L Y F N D I L E K E T G L P G C D Y G K V E G T A V G F S F F S H S I Y G G G G P G V F N G N H V V T R H S R G F A I P C V C A A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
G G G G T T S S S S S
S G G G
T T S T T T
S S S S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . .

Sequence A L D A G T Q M F S I E S T S G L I G D V F G A I P E F R E P I K A V A G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T T
S T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	F	S	L	R	N	I	M	A	N	H	V	A	A	I	S	N	R	N	A	M	N	A	S	A	L	S	S	I	Y	E	Q	S	G	I	F	E	M	G	G	A	V	G	M	F	E	R	H	Q	L	L	G	L	A	Y	Q	G	L	N	A	N	N	L	L	Y	D	I	V	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G											T	T	T																				T	T		S	S	T																	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	G	K	D	G	T	I	G	T	V	I	E	S	V	V	R	R	A	I	E	A	G	I	I	S	V	D	K	T	A	P	S	G	Y	N	F	Y	K	A	N	D	V	P	K	W	N	A	C	A	A	V	G	T	L	A	A	T	L	V	N	C	G	A	G	R	A	A	Q	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T																	T	T	S								T	T	S							S	S																								T		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	S	T	L	L	Y	F	N	D	I	L	E	K	E	T	G	L	P	G	C	D	Y	G	K	V	E	G	T	A	V	G	F	S	F	F	S	H	S	I	Y	G	G	G	G	P	G	V	F	N	G	N	H	V	V	T	R	H	S	R	G	F	A	I	P	C	V	C	A	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S			G	G	G	G												T	T	S	S	S	S	S			S	G	G	G			T	T	S	T	T	T		S	S	S	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Sequence	A	L	D	A	G	T	Q	M	F	S	I	E	S	T	S	G	L	I	G	D	V	F	G	A	I	P	E	F	R	E	P	I	K	A	V	A	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S			S	S														T	T						S							T