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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1dpea_

Fold library idFoldSuperfamilyFamily
d1dpea_Periplasmic binding protein-like IIPeriplasmic binding protein-like IIPhosphate binding protein-like


Added to library: Tue Mar 16 14:06:35 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KTLVYCSEGSPEGFNPQLFISGTTYDASSVPLYNRLVEFKIGTTEVIPGLAEKWEVSEDGKTYTFHLRKG
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Known secondary structure (DSSP)
SS

S
S
GGG


T


S
TTSS
SS
TTS

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VKWHDNKEFKPTRELNADDVVFSFDRQKNAQNPYHKVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLT
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Known secondary structure (DSSP)





SS


SS



TTSTTTTGGG


TTTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RPEAPFLADLAMDFASILSKEYADAMMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWGTKPQ
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Known secondary structure (DSSP) S

TTTTSGGG



TT
TTS


SSSTTT
TT
SS


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence IDTLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKPLDDVK
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Known secondary structure (DSSP)
S


TTS
SB
SS

GGG
TT
S
TTSTTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAKALLKEAGLEKGFSIDLWA
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Known secondary structure (DSSP) TS
TTS
SSSS
TTSTT

TT






TT
TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence MPVQRPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKRAKDGEHQTVMMGWTGDNGDPDNFFATEF
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Known secondary structure (DSSP)
SS
BTTBS
TTT


TT

S
SSS
T
 .........430.........440.........450.........460.........470.........480.........490
Sequence SCAASEQGSNYSKWCYKPFEDLIQPARATDDHNKRVELYKQAQVVMHDQAPALIIAHSTVFEPVRKEVKG
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Known secondary structure (DSSP) ST

TT







STTS
 .........500.......
Sequence YVVDPLGKHHFENVSIE
Predicted secondary structure






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Known secondary structure (DSSP)



TTS



TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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