Fold library entry viewer: d1dota1

Added to library: Tue Mar 16 14:06:01 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	P	P	K	T	T	V	R	W	C	T	I	S	S	A	E	E	K	K	C	N	S	L	K	D	H	M	Q	Q	E	R	V	T	L	S	C	V	Q	K	A	T	Y	L	D	C	I	K	A	I	S	N	N	E	A	D	A	I	S	L	D	G	G	Q	V	F	E	A	G	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S	T	T									T	T	T	T	T	T	S	S	S								S	S										T	T	T			B												T	S	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	Y	K	L	K	P	I	A	A	E	V	Y	E	R	S	G	G	S	T	T	S	Y	Y	A	V	A	V	V	K	K	G	T	D	F	M	I	K	D	L	R	G	K	T	S	C	H	T	G	L	G	R	S	A	G	W	N	I	P	I	G	T	L	I	H	R	E	D	I	E	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T													S	S	S				S										T	T					G	G	G		T	T						S		S	S		T	T	T	T											S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	G	I	E	S	G	I	S	E	Q	A	V	A	K	F	F	S	A	S	C	V	P	G	A	T	I	E	Q	K	L	C	R	Q	C	K	G	D	A	K	T	K	C	L	R	N	G	P	Y	S	G	Y	S	G	A	F	Q	C	L	K	D	G	K	G	D	V	A	F	V	K	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S				S							S	S					T	T			S		S	T	T	T	T	T			S		S	S	S	T	T	S	S	S	S	T	T													T	S		S						T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	T	V	Q	E	N	A	P	E	E	K	D	E	Y	E	L	L	C	L	D	G	S	R	Q	P	V	D	S	Y	K	T	C	N	W	A	R	V	A	A	H	A	V	V	A	R	D	D	S	K	I	D	D	I	W	S	F	L	G	M	Q	A	Y	S	L	G	V	D	T	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							S	S	S	G	G	G						T	T	T					T	T			S	S	S		S												S	S	S																	S	S	S		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Sequence	D	F	H	L	F	G	P	P	G	K	K	D	P	V	L	K	D	L	L	F	K	D	S	A	I	M	L	K	R	V	P	E	L	M	D	S	Q	L	Y	L	G	F	E	Y	Y	S	A	I	Q	S	L	R	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S	S				S				G	G	G	S	S	S	S	S		T	T									T	T									S

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PDB structure

FASTA sequence

Hidden Markov model

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