Fold library entry viewer: d1dmta_

Added to library: Tue Mar 16 12:00:09 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	I	C	K	S	S	D	C	I	K	S	A	A	R	L	I	Q	N	M	D	A	T	T	E	P	C	T	D	F	F	K	Y	A	C	G	G	W	L	K	R	N	V	I	P	E	T	S	S	R	Y	G	N	F	D	I	L	R	D	E	L	E	V	V	L	K	D	V	L	Q	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B			S																T	T	S		T	T	T																		T	T		S																					S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	K	T	E	D	I	V	A	V	Q	K	A	K	A	L	Y	R	S	C	I	N	E	S	A	I	D	S	R	G	G	E	P	L	L	K	L	L	P	D	I	Y	G	W	P	V	A	T	E	N	W	E	Q	K	Y	G	A	S	W	T	A	E	K	A	I	A	Q	L	N	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																								T	T	T							G	G	G	G	T			G	G	G	S	T	T					T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	G	K	K	V	L	I	N	L	F	V	G	T	D	D	K	N	S	V	N	H	V	I	H	I	D	Q	P	R	L	G	L	P	S	R	D	Y	Y	E	C	T	G	I	Y	K	E	A	C	T	A	Y	V	D	F	M	I	S	V	A	R	L	I	R	Q	E	E	R	L	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S								T	T															S	S	S	S	G	G	G	G	G		S	G	G	G																						T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	E	N	Q	L	A	L	E	M	N	K	V	M	E	L	E	K	E	I	A	N	A	T	A	K	P	E	D	R	N	D	P	M	L	L	Y	N	K	M	T	L	A	Q	I	Q	N	N	F	S	L	E	I	N	G	K	P	F	S	W	L	N	F	T	N	E	I	M	S	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							S			G	G	G	S																			S				S	T	T														G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	I	S	I	T	N	E	E	D	V	V	V	Y	A	P	E	Y	L	T	K	L	K	P	I	L	T	K	Y	S	A	R	D	L	Q	N	L	M	S	W	R	F	I	M	D	L	V	S	S	L	S	R	T	Y	K	E	S	R	N	A	F	R	K	A	L	Y	G	T	T	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					T	T						S													T	T	S																		G	G	G	S							T	T											S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	A	T	W	R	R	C	A	N	Y	V	N	G	N	M	E	N	A	V	G	R	L	Y	V	E	A	A	F	A	G	E	S	K	H	V	V	E	D	L	I	A	Q	I	R	E	V	F	I	Q	T	L	D	D	L	T	W	M	D	A	E	T	K	K	R	A	E	E	K	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S															T	T																								T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	I	K	E	R	I	G	Y	P	D	D	I	V	S	N	D	N	K	L	N	N	E	Y	L	E	L	N	Y	K	E	D	E	Y	F	E	N	I	I	Q	N	L	K	F	S	Q	S	K	Q	L	K	K	L	R	E	K	V	D	K	D	E	W	I	S	G	A	A	V	V	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S		T													T	T	T					T	T																			T	T	T	T	S	B			T	T			S	S		S	S		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	F	Y	S	S	G	R	N	Q	I	V	F	P	A	G	I	L	Q	P	P	F	F	S	A	Q	Q	S	N	S	L	N	Y	G	G	I	G	M	V	I	G	H	E	I	T	H	G	F	D	D	N	G	R	N	F	N	K	D	G	D	L	V	D	W	W	T	Q	Q	S	A	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T						G	G	G	S	S	T	T	T			T	T	S								T											G	G	G	S	T	T	G	G	G	B		T	T	S		B				S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	K	E	Q	S	Q	C	M	V	Y	Q	Y	G	N	F	S	W	D	L	A	G	G	Q	H	L	N	G	I	N	T	L	G	E	N	I	A	D	N	G	G	L	G	Q	A	Y	R	A	Y	Q	N	Y	I	K	K	N	G	E	E	K	L	L	P	G	L	D	L	N	H	K	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T				G	G	G	T	T					T	T	T	T																														B		T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.
Sequence	L	F	F	L	N	F	A	Q	V	W	C	G	T	Y	R	P	E	Y	A	V	N	S	I	K	T	D	V	H	S	P	G	N	F	R	I	I	G	T	L	Q	N	S	A	E	F	S	E	A	F	H	C	R	K	N	S	Y	M	N	P	E	K	K	C	R	V	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T																	S	S													T								T	T			T	T	S	T	T			S

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PDB structure

FASTA sequence

Hidden Markov model

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