PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1ct5a_

Fold library id	Fold	Superfamily	Family
d1ct5a_	TIM beta/alpha-barrel	PLP-binding barrel	"Hypothetical" protein ybl036c

Links to external resources
Added to library: Tue Mar 16 14:24:06 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T G I T Y D E D R K T Q L I A Q Y E S V R E V V N A E A K N V K I L L L V V S K L K P A S D I Q I L Y D H G V R E F G E N Y V Q E L I E K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K L L P D D I K W H F I G G L Q T N K C K D L A K V P N L Y S V E T I D S L K K A K K L N E S R A K F Q P D C N P I L C N V Q I N T S H E D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S
G G G
T T
S
T T S
B
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q K S G L N N E A E I F E V I D F F L S E E C K Y I K L N G L X T I G S W N R D F A T L V E W K K K I D A K F G T S L K L S X G X S A D F R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S B
S T T
S
T T T

. . . . . . . . . 220 . . . . . . . .

Sequence E A I R Q G T A E V R I G T D I F G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	G	I	T	Y	D	E	D	R	K	T	Q	L	I	A	Q	Y	E	S	V	R	E	V	V	N	A	E	A	K	N	V	K	I	L	L	L	V	V	S	K	L	K	P	A	S	D	I	Q	I	L	Y	D	H	G	V	R	E	F	G	E	N	Y	V	Q	E	L	I	E	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																														T										T	T	S												T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	L	L	P	D	D	I	K	W	H	F	I	G	G	L	Q	T	N	K	C	K	D	L	A	K	V	P	N	L	Y	S	V	E	T	I	D	S	L	K	K	A	K	K	L	N	E	S	R	A	K	F	Q	P	D	C	N	P	I	L	C	N	V	Q	I	N	T	S	H	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		T	T							S				G	G	G								T	T									S																T	T	S									B			S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	K	S	G	L	N	N	E	A	E	I	F	E	V	I	D	F	F	L	S	E	E	C	K	Y	I	K	L	N	G	L	X	T	I	G	S	W	N	R	D	F	A	T	L	V	E	W	K	K	K	I	D	A	K	F	G	T	S	L	K	L	S	X	G	X	S	A	D	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S	B															S	T	T			S																																									T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Sequence	E	A	I	R	Q	G	T	A	E	V	R	I	G	T	D	I	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		S					S