Fold library entry viewer: d1clca1

Added to library: Tue Mar 16 12:45:47 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	M	N	V	Y	E	D	A	F	K	T	A	M	L	G	M	Y	L	L	R	C	G	T	S	V	S	A	T	Y	N	G	I	H	Y	S	H	G	P	C	H	T	N	D	A	Y	L	D	Y	I	N	G	Q	H	T	K	K	D	S	T	K	G	W	H	D	A	G	D	Y	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T														T	B		S	S							T	T										T	T			B		T	T	T	T	S				B						S	B			S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	V	V	N	A	G	I	T	V	G	S	M	F	L	A	W	E	H	F	K	D	Q	L	E	P	V	A	L	E	I	P	E	K	N	N	S	I	P	D	F	L	D	E	L	K	Y	E	I	D	W	I	L	T	M	Q	Y	P	D	G	S	G	R	V	A	H	K	V	S	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S					T	T				S	S	G	G	G	G	S	S	S																T	T	B		T	T	S	S			B							S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	F	G	G	F	I	M	P	E	N	E	H	D	E	R	F	F	V	P	W	S	S	A	A	T	A	D	F	V	A	M	T	A	M	A	A	R	I	F	R	P	Y	D	P	Q	Y	A	E	K	C	I	N	A	A	K	V	S	Y	E	F	L	K	N	N	P	A	N	V	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				S			G	G	G			S																											T	T	T																								S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	Q	S	G	F	S	T	G	E	Y	A	T	V	S	D	A	D	D	R	L	W	A	A	A	E	M	W	E	T	L	G	D	E	E	Y	L	R	D	F	E	N	R	A	A	Q	F	S	K	K	I	E	A	D	F	D	W	D	N	V	A	N	L	G	M	F	T	Y	L	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			S						S		S																														T		S	S	S			S	S			T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	R	P	G	K	N	P	A	L	V	Q	S	I	K	D	S	L	L	S	T	A	D	S	I	V	R	T	S	Q	N	H	G	Y	G	R	T	L	G	T	T	Y	Y	W	G	C	N	G	T	V	V	R	Q	T	M	I	L	Q	V	A	N	K	I	S	P	N	N	D	Y	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																											T	S	T	T			T	T	T	T				T	T								T											S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	A	L	D	A	I	S	H	V	F	G	R	N	Y	Y	N	R	S	Y	V	T	G	L	G	I	N	P	P	M	N	P	H	D	R	R	S	G	A	D	G	I	W	E	P	W	P	G	Y	L	V	G	G	G	W	P	G	P	K	D	W	V	D	I	Q	D	S	Y	Q	T	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T		S	T	T				S	B	T	T	S	S	S	S			S	S		B							S	S		S	S			S	S		B						S	S	T	T						T	T		T	T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Sequence	E	I	A	I	N	W	N	A	A	L	I	Y	A	L	A	G	F	V	N	Y	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B															T	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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