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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1cb6a2

Fold library idFoldSuperfamilyFamily
d1cb6a2Periplasmic binding protein-like IIPeriplasmic binding protein-like IITransferrin


Added to library: Tue Mar 16 13:30:37 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EEEVAARRARVVWCAVGEQELRKCNQWSGLSEGSVTCSSASTTEDCIALVLKGEADAMSLDGGYVYTAGK
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Known secondary structure (DSSP)
SSTTTSSSTS

B
 .........80.........90.........100.........110.........120.........130.........140
Sequence CGLVPVLAENYKSQQSSDPDPNCVDRPVEGYLAVAVVRRSDTSLTWNSVKGKKSCHTAVDRTAGWNIPMG
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Known secondary structure (DSSP) TT

SSSS



TTGGGS



SS
TT

GGG
TTSS
TT
TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LLFNQTGSCKFDEYFSQSCAPGSDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAF
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Known secondary structure (DSSP)



GGGTSS
TTS
TTSGGGTT


STTS
STT
SSTTSTT
TTS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence VKDVTVLQNTDGNNNEAWAKDLKLADFALLCLDGKRKPVTEARSCHLAMAPNHAVVSRMDKVERLKQVLL
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Known secondary structure (DSSP) TTSTTSS
ST

GGG
TTS
GGGGGGS
S



GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence HQQAKFGRNGSDCPDKFCLFQSETKNLLFNDNTECLARLHGKTTYEKYLGPQYVAGITNLKKCSTSPLLE
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Known secondary structure (DSSP) STT
SSTTTT

TT
SSS


SS
TT

TT

S



 .......
Sequence ACEFLRK
Predicted secondary structure

SS confidence






Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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